BLASTX nr result

ID: Lithospermum22_contig00044796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044796
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    49   1e-06

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = +3

Query: 267 NATTLSLVPKLDHLSSIKDNRPISCCNNIYKAITRVL 377
           N+T L+L+PK      IKD RPISCCN +YKAI+++L
Sbjct: 231 NSTILALIPKKKEAREIKDYRPISCCNVLYKAISKIL 267



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 176 EFYKHHWEVVSKDVLEAFLYIFATG 250
           EFYK  WE++  +V+ A    FA G
Sbjct: 200 EFYKASWEIIGDEVIIAIQSFFAKG 224


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