BLASTX nr result

ID: Lithospermum22_contig00044767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044767
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34885.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]   119   3e-25
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   116   2e-24
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   114   6e-24
gb|ADE76509.1| unknown [Picea sitchensis]                              93   2e-17

>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = +2

Query: 68  GYVLLSNIYASAGRWHDVSVIRKLMKEKGLKKSGGCSWIEVKNRVHLFYSQDGSHGQSLE 247
           GYVLLSNIYASAGRW DVS IRKLM+EKGLKKSGGCSW+EV+N+VH FYS+DGSH QS E
Sbjct: 654 GYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNE 713

Query: 248 MFGILDVLAFDMFVL 292
           ++G L +L  +M VL
Sbjct: 714 IYGTLQLLRSEMLVL 728


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/75 (74%), Positives = 65/75 (86%)
 Frame = +2

Query: 68  GYVLLSNIYASAGRWHDVSVIRKLMKEKGLKKSGGCSWIEVKNRVHLFYSQDGSHGQSLE 247
           GYVLLSNIYASAGRW DVS IRKLM+EKGLKKSGGCSW+EV+N+VH FYS+DGSH QS E
Sbjct: 654 GYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDE 713

Query: 248 MFGILDVLAFDMFVL 292
           ++G L +L  +M VL
Sbjct: 714 IYGTLQLLRSEMLVL 728


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%)
 Frame = +2

Query: 68  GYVLLSNIYASAGRWHDVSVIRKLMKEKGLKKSGGCSWIEVKNRVHLFYSQDGSHGQSLE 247
           GYVLLSNIYASAGRW DVS IRKLM+EKGLKKSGGCSW+EV+N+VH FYS+DGSH QS E
Sbjct: 654 GYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNE 713

Query: 248 MFGILDVLAFDM 283
           ++G L +L  +M
Sbjct: 714 IYGTLQLLRSEM 725


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/72 (69%), Positives = 63/72 (87%)
 Frame = +2

Query: 68  GYVLLSNIYASAGRWHDVSVIRKLMKEKGLKKSGGCSWIEVKNRVHLFYSQDGSHGQSLE 247
           GYVLLSNIYASAGRW DV  +RKLMK KGLKKSGGCSW+E+++RVH FYS+DG+H QS E
Sbjct: 654 GYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAE 713

Query: 248 MFGILDVLAFDM 283
           ++ IL++L ++M
Sbjct: 714 IYEILELLGYEM 725


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/71 (59%), Positives = 56/71 (78%)
 Frame = +2

Query: 71  YVLLSNIYASAGRWHDVSVIRKLMKEKGLKKSGGCSWIEVKNRVHLFYSQDGSHGQSLEM 250
           YVLLSNIYA+AGRW DV+ +RK+MK++G++K  GCSWIEVKN+VH F  +D SH Q+ E+
Sbjct: 80  YVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEI 139

Query: 251 FGILDVLAFDM 283
           +  L+ LA  M
Sbjct: 140 YSTLEELARQM 150


Top