BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044723
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   185   3e-45
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   181   6e-44
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...   176   2e-42
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42

>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/147 (57%), Positives = 116/147 (78%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           NVVSWNS+LAGY+K G++ VAQ+VFDE+P++DV+SWNSM+ GY + G+M++A  LF+ MP
Sbjct: 173 NVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMP 232

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           +RN ASWN MISG+   G ++ AR  FD MP KN VS++TMI+ YSK GDV++A ++F +
Sbjct: 233 ERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQ 292

Query: 81  VKEKGLILYNAMIACYVQNGLPNVAVS 1
           V  K L+L+NAMIACY QN  PN A++
Sbjct: 293 VGGKDLLLFNAMIACYAQNSRPNEALN 319



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 41/174 (23%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           N  SWN++++G+V+ G+I+ A+  FD MP+++ VSW +M+ GY K G++D A  LF  + 
Sbjct: 235 NFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVG 294

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEM--PYKN------------------------ 160
            ++   +N MI+ YA +     A  LF+ M  PY N                        
Sbjct: 295 GKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFG 354

Query: 159 ---------------GVSYVTMITSYSKQGDVEAARKIFAEVKEKGLILYNAMI 43
                          G     ++  Y+K G ++ A ++F  +++K L+ Y AMI
Sbjct: 355 PWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMI 408



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/71 (38%), Positives = 48/71 (67%)
 Frame = -2

Query: 234 MISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAEVKEKGLILY 55
           ++  Y   G +E+AR++FDEM  +N VS+ +M+  Y K GD+  A+++F E+ +K +I +
Sbjct: 149 LVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISW 208

Query: 54  NAMIACYVQNG 22
           N+MI+ Y + G
Sbjct: 209 NSMISGYARAG 219


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/146 (57%), Positives = 114/146 (78%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           NVVSWNS+LAGY+K G++ VAQ+VFDE+P++DV+SWNSM+ GY + G+M++A  LF+ MP
Sbjct: 173 NVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMP 232

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           +RN ASWN MISGY   G ++ AR  FD MP +N VS++TMI+ YSK GDV++A ++F +
Sbjct: 233 ERNFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQ 292

Query: 81  VKEKGLILYNAMIACYVQNGLPNVAV 4
           V  K L+L+NAMIACY QN  P  A+
Sbjct: 293 VGGKDLLLFNAMIACYAQNSRPKEAL 318



 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/118 (42%), Positives = 77/118 (65%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           +V+SWNS+++GY + G++E A  +F +MPER+  SWN+M+ GY + G++D A   F  MP
Sbjct: 204 DVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMP 263

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIF 88
           QRN  SW  MISGY+  G V+ A  LFD++  K+ + +  MI  Y++    + A K+F
Sbjct: 264 QRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLF 321



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 41/174 (23%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           N  SWN++++GYV+ G+I+ A+  FD MP+R+ VSW +M+ GY K G++D A  LF  + 
Sbjct: 235 NFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVG 294

Query: 261 QRNAASWNVMISGYANSGLVELARRLF------------DEMPYKNGVS----------- 151
            ++   +N MI+ YA +   + A +LF            DEM   + +S           
Sbjct: 295 GKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFG 354

Query: 150 ------------------YVTMITSYSKQGDVEAARKIFAEVKEKGLILYNAMI 43
                                ++  Y+K G ++ A ++F  +++K L+ Y AMI
Sbjct: 355 PWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMI 408



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/78 (37%), Positives = 51/78 (65%)
 Frame = -2

Query: 234 MISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAEVKEKGLILY 55
           ++  Y   G +E+AR++FDEM  +N VS+ +M+  Y K GD+  A+++F E+ +K +I +
Sbjct: 149 LVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISW 208

Query: 54  NAMIACYVQNGLPNVAVS 1
           N+MI+ Y + G    A+S
Sbjct: 209 NSMISGYARAGDMEKALS 226


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  181 bits (459), Expect = 6e-44
 Identities = 84/146 (57%), Positives = 113/146 (77%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           NVVSWNS+LAGY+K G++ VAQ+VFDE+P++DV+SWNSM+ GY + G+M++A  LF+ MP
Sbjct: 169 NVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMP 228

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           +RN ASWN MISGY   G ++ AR  FD MP  N VS++TMI+ YSK GDV++A ++F +
Sbjct: 229 ERNFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQ 288

Query: 81  VKEKGLILYNAMIACYVQNGLPNVAV 4
           V  K L+L+NAMIACY QN  P  A+
Sbjct: 289 VGGKDLLLFNAMIACYAQNSRPKEAL 314



 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/118 (41%), Positives = 76/118 (64%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           +V+SWNS+++GY + G++E A  +F +MPER+  SWN+M+ GY + G++D A   F  MP
Sbjct: 200 DVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMP 259

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIF 88
           Q N  SW  MISGY+  G V+ A  LFD++  K+ + +  MI  Y++    + A K+F
Sbjct: 260 QXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLF 317



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 41/174 (23%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           N  SWN++++GYV+ G+I+ A+  FD MP+ + VSW +M+ GY K G++D A  LF  + 
Sbjct: 231 NFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVG 290

Query: 261 QRNAASWNVMISGYANSGLVELARRLF------------DEMPYKNGVS----------- 151
            ++   +N MI+ YA +   + A +LF            DEM   + +S           
Sbjct: 291 GKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFG 350

Query: 150 ------------------YVTMITSYSKQGDVEAARKIFAEVKEKGLILYNAMI 43
                                ++  Y+K G ++ A ++F  +++K L+ Y AMI
Sbjct: 351 PWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMI 404



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/78 (37%), Positives = 51/78 (65%)
 Frame = -2

Query: 234 MISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAEVKEKGLILY 55
           ++  Y   G +E+AR++FDEM  +N VS+ +M+  Y K GD+  A+++F E+ +K +I +
Sbjct: 145 LVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISW 204

Query: 54  NAMIACYVQNGLPNVAVS 1
           N+MI+ Y + G    A+S
Sbjct: 205 NSMISGYARAGDMEKALS 222


>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/146 (55%), Positives = 107/146 (73%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           NVVSWNS+L+GY+K G ++  Q+ FDE+P +DV+SWN MV GY K G MD+A  LF+ MP
Sbjct: 169 NVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMP 228

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           +RN ASWN MI+GY + G +  AR LFD MP +N VS +TMI  YSK GDV +AR++F +
Sbjct: 229 ERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQ 288

Query: 81  VKEKGLILYNAMIACYVQNGLPNVAV 4
           + +K L+ YNAMIACY Q+  P  A+
Sbjct: 289 MDDKDLLSYNAMIACYAQSSKPKEAL 314



 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/118 (42%), Positives = 77/118 (65%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           +V+SWN +++GY K G+++ A  +F +MPER+  SWN+M+ GY   G++ +A  LF  MP
Sbjct: 200 DVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMP 259

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIF 88
           +RN+ S   MI+GY+ SG V  AR LFD+M  K+ +SY  MI  Y++    + A  +F
Sbjct: 260 RRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLF 317



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           N  SWN+++ GYV CG I  A+++FD MP R+ VS  +M+ GY K G++  A  LF  M 
Sbjct: 231 NFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMD 290

Query: 261 QRNAASWNVMISGYANSGLVELARRLF------DEMPYKNGVSYVTMITSYSKQGDVEAA 100
            ++  S+N MI+ YA S   + A  LF      D   + + ++  ++I++ S+ G++E  
Sbjct: 291 DKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHW 350

Query: 99  RKIFAEVKEKGLI----LYNAMIACYVQNG 22
           R I +++   G++    L  A+I  Y + G
Sbjct: 351 RWIESQINNFGIVLDDHLATALIDLYAKCG 380


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/146 (52%), Positives = 113/146 (77%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           NVVSWNS+L+G++K G +  AQ+VFD++ ++DV+SWNSM+ GY K+G+MD+A VLF+ MP
Sbjct: 189 NVVSWNSILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQMP 248

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           ++N +SWN +ISGY N G ++ A R FD MP +N VS++TMI  YSK GDV++A K+F +
Sbjct: 249 EKNYSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFDQ 308

Query: 81  VKEKGLILYNAMIACYVQNGLPNVAV 4
           + +K L+ +NAMI+C+ QN  P  A+
Sbjct: 309 IAKKDLLTFNAMISCFAQNSQPRKAL 334



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/121 (36%), Positives = 80/121 (66%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           +V+SWNS+++GY K G+++ A  +F +MPE++  SWN+++ GY   G++  A   F  MP
Sbjct: 220 DVISWNSMISGYAKIGDMDRACVLFQQMPEKNYSSWNALISGYVNCGDIKSAWRFFDAMP 279

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEMPYKNGVSYVTMITSYSKQGDVEAARKIFAE 82
           +RN+ SW  MI+GY+  G V+ A +LFD++  K+ +++  MI+ +++      A  +F+E
Sbjct: 280 ERNSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSE 339

Query: 81  V 79
           +
Sbjct: 340 M 340



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 41/181 (22%)
 Frame = -2

Query: 441 NVVSWNSVLAGYVKCGEIEVAQKVFDEMPERDVVSWNSMVLGYGKVGNMDQAEVLFRLMP 262
           N  SWN++++GYV CG+I+ A + FD MPER+ VSW +M+ GY K G++D A  LF  + 
Sbjct: 251 NYSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFDQIA 310

Query: 261 QRNAASWNVMISGYANSGLVELARRLFDEM------------------------------ 172
           +++  ++N MIS +A +     A  LF EM                              
Sbjct: 311 KKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDLRFA 370

Query: 171 ----PYKNGVS-------YVTMITSYSKQGDVEAARKIFAEVKEKGLILYNAMIACYVQN 25
                Y N +           ++  Y+K G V+ A ++F  + +K ++ Y+AMI+    N
Sbjct: 371 SWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGCGIN 430

Query: 24  G 22
           G
Sbjct: 431 G 431