BLASTX nr result

ID: Lithospermum22_contig00044675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044675
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142093.1| PREDICTED: probable pectate lyase 4-like [Cu...    80   2e-13
gb|AFK48528.1| unknown [Lotus japonicus]                               78   8e-13
ref|XP_002876285.1| pectate lyase family protein [Arabidopsis ly...    75   7e-12
ref|NP_191074.2| pectate lyase [Arabidopsis thaliana] gi|1908865...    74   9e-12
ref|XP_002323433.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_004142093.1| PREDICTED: probable pectate lyase 4-like [Cucumis sativus]
           gi|449516487|ref|XP_004165278.1| PREDICTED: probable
           pectate lyase 4-like [Cucumis sativus]
          Length = 376

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/44 (81%), Positives = 42/44 (95%)
 Frame = -1

Query: 134 LPYANVDSSLRALACKAEGFGRNAIGGLHGNLYCVTSLADDGPG 3
           LPY +VDSSLRALA +AEGFGR+AIGGLHG++YCVT+LADDGPG
Sbjct: 49  LPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPG 92


>gb|AFK48528.1| unknown [Lotus japonicus]
          Length = 331

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -1

Query: 146 MGLVLPYANVDSSLRALACKAEGFGRNAIGGLHGNLYCVTSLADDGPG 3
           M  +LPY +VDS+LRALA +AEGFGRNAIGGLHG LY VT+LADDGPG
Sbjct: 1   MASMLPYGDVDSTLRALAGQAEGFGRNAIGGLHGPLYLVTTLADDGPG 48


>ref|XP_002876285.1| pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322123|gb|EFH52544.1| pectate lyase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 134 LPYANVDSSLRALACKAEGFGRNAIGGLHGNLYCVTSLADDGPG 3
           LPYA+ D SLRALA +AEGFGR A+GGLHG+LY VTSLADDGPG
Sbjct: 4   LPYADADGSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPG 47


>ref|NP_191074.2| pectate lyase [Arabidopsis thaliana] gi|190886519|gb|ACE95182.1|
           At3g55140 [Arabidopsis thaliana]
           gi|192571722|gb|ACF04806.1| At3g55140 [Arabidopsis
           thaliana] gi|332645823|gb|AEE79344.1| pectate lyase
           [Arabidopsis thaliana]
          Length = 331

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 134 LPYANVDSSLRALACKAEGFGRNAIGGLHGNLYCVTSLADDGPG 3
           LPYA+ D SLRALA +AEGFGR A+GGLHG+LY VTSLADDGPG
Sbjct: 4   LPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPG 47


>ref|XP_002323433.1| predicted protein [Populus trichocarpa] gi|222868063|gb|EEF05194.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = -1

Query: 146 MGLVLPYANVDSSLRALACKAEGFGRNAIGGLHGNLYCVTSLADDGPG 3
           M   LPY +VDSSLRALA +AEGFGR+A GGLHG +Y VT+LADDGPG
Sbjct: 1   MATALPYPHVDSSLRALAAQAEGFGRSANGGLHGPIYYVTTLADDGPG 48


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