BLASTX nr result
ID: Lithospermum22_contig00044633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00044633
(546 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22579.3| unnamed protein product [Vitis vinifera] 132 3e-29
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v... 131 8e-29
ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|2... 130 1e-28
ref|XP_002513614.1| conserved hypothetical protein [Ricinus comm... 125 6e-27
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ... 123 2e-26
>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
Length = 1217
Score = 132 bits (332), Expect = 3e-29
Identities = 78/195 (40%), Positives = 112/195 (57%), Gaps = 14/195 (7%)
Frame = +2
Query: 2 EEVPNSVLMEGMNGDKHFNKEQHSIRLQSKRIRTKRNSLVLNDELKGKINTLYERFKDDQ 181
EE + ++G + + H +S+R+ ++ LVL+ E++ I LYE+FKDD+
Sbjct: 871 EEGVTPISSSKIDGKTNSDNVGHYAEHESERVSKRKRRLVLSAEVEKNIKDLYEKFKDDR 930
Query: 182 QCCSLIAQALDENGNISAVQISRTLKKLGCNIPHKARTTII--------------SNADD 319
C LIA+ALD + +S VQ+S LK+LG I K R + + A
Sbjct: 931 HCSRLIAEALDPDCKVSPVQVSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQLMEEARAVG 990
Query: 320 RSGDKLSSLNDSGGNNLPRKPLHTRKRVRAFSEDQEQKIKDLFEQFKDHKKCSYMIASEL 499
L N+S G+ L RK LHTRKRVRAFS+DQE+ I+ L+EQFK HK+C+YMIAS L
Sbjct: 991 EESAHLVCSNNSEGS-LVRKSLHTRKRVRAFSKDQEETIRALYEQFKGHKRCTYMIASAL 1049
Query: 500 DAEGTFSAVQITRKL 544
+ +A Q++RKL
Sbjct: 1050 AGDDILTAAQVSRKL 1064
>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
Length = 1269
Score = 131 bits (329), Expect = 8e-29
Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 15/184 (8%)
Frame = +2
Query: 38 NGDKH-FNKEQHSIRLQSKRIRTKRNSLVLNDELKGKINTLYERFKDDQQCCSLIAQALD 214
N DK+ H +S+R+ ++ LVL+ E++ I LYE+FKDD+ C LIA+ALD
Sbjct: 873 NSDKYDVQHVGHYAEHESERVSKRKRRLVLSAEVEKNIKDLYEKFKDDRHCSRLIAEALD 932
Query: 215 ENGNISAVQISRTLKKLGCNIPHKARTTII--------------SNADDRSGDKLSSLND 352
+ +S VQ+S LK+LG I K R + + A L N+
Sbjct: 933 PDCKVSPVQVSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQLMEEARAVGEESAHLVCSNN 992
Query: 353 SGGNNLPRKPLHTRKRVRAFSEDQEQKIKDLFEQFKDHKKCSYMIASELDAEGTFSAVQI 532
S G+ L RK LHTRKRVRAFS+DQE+ I+ L+EQFK HK+C+YMIAS L + +A Q+
Sbjct: 993 SEGS-LVRKSLHTRKRVRAFSKDQEETIRALYEQFKGHKRCTYMIASALAGDDILTAAQV 1051
Query: 533 TRKL 544
+RKL
Sbjct: 1052 SRKL 1055
>ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|222875069|gb|EEF12200.1|
predicted protein [Populus trichocarpa]
Length = 1341
Score = 130 bits (327), Expect = 1e-28
Identities = 71/166 (42%), Positives = 106/166 (63%), Gaps = 12/166 (7%)
Frame = +2
Query: 83 QSKRIRTKRNSLVLNDELKGKINTLYERFKDDQQCCSLIAQALDENGNISAVQISRTLKK 262
+S + ++ VL DE++ KI LYE+FKDD+ C LIA++LD +G +S Q+ LK+
Sbjct: 928 ESVSVPRRKRRFVLTDEMEMKIKDLYEKFKDDENCSHLIAESLDPDGQVSRAQVINKLKQ 987
Query: 263 LGCNIPHKARTTIISNADDRSGDKL----------SSLNDSGG--NNLPRKPLHTRKRVR 406
LG + K R + + D+L S+L++S +LPR L TRKRVR
Sbjct: 988 LGLKVASKKRKRSVGRPFSTNPDQLGENGEIIEKESNLHNSIDLEGSLPR--LSTRKRVR 1045
Query: 407 AFSEDQEQKIKDLFEQFKDHKKCSYMIASELDAEGTFSAVQITRKL 544
AF++DQE+ IK LFEQFKDH++CSYMIA+ + ++ +F+A Q++RKL
Sbjct: 1046 AFNKDQEEMIKALFEQFKDHRRCSYMIANAMGSDNSFTAAQVSRKL 1091
>ref|XP_002513614.1| conserved hypothetical protein [Ricinus communis]
gi|223547522|gb|EEF49017.1| conserved hypothetical
protein [Ricinus communis]
Length = 1047
Score = 125 bits (313), Expect = 6e-27
Identities = 67/148 (45%), Positives = 96/148 (64%)
Frame = +2
Query: 101 TKRNSLVLNDELKGKINTLYERFKDDQQCCSLIAQALDENGNISAVQISRTLKKLGCNIP 280
+KR LVL DE++ +I L+E++KDD C LIA++LD G++S Q+ LK+LG +
Sbjct: 838 SKRRRLVLTDEMEMRIKELHEKYKDDGSCVRLIAESLDPAGHVSPAQVFNKLKQLGLKVS 897
Query: 281 HKARTTIISNADDRSGDKLSSLNDSGGNNLPRKPLHTRKRVRAFSEDQEQKIKDLFEQFK 460
K R + N D L ++G N TRK+VRAFS+DQE+ I+ LFEQFK
Sbjct: 898 SKKR---LRNVDKEFSTFPDQLVENGRN--------TRKKVRAFSKDQEEIIRALFEQFK 946
Query: 461 DHKKCSYMIASELDAEGTFSAVQITRKL 544
+HK+CSYMIA+ L A+ +F+A Q++RKL
Sbjct: 947 EHKRCSYMIANALAADNSFTAAQVSRKL 974
>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
factor [Medicago truncatula]
Length = 1335
Score = 123 bits (309), Expect = 2e-26
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 7/188 (3%)
Frame = +2
Query: 2 EEVPNSVLMEGMNGDKHFNKEQHSIRLQSKRIRTKRNSLVLNDELKGKINTLYERFKDDQ 181
+++ G D+ N + + + + ++ L+L+ EL+ +I LYE+FKDD+
Sbjct: 903 DDIEGIASTSGSKNDRDDNNGEPWLEDEYQTAPRRKKKLILDAELEIQIKDLYEKFKDDR 962
Query: 182 QCCSLIAQALDENGNISAVQISRTLKKLGCNIPHKARTTIISNADDRSGDKLSSLNDSGG 361
C IA+ LD +G IS QIS LKKLG I + + S ++L +GG
Sbjct: 963 NCSRRIAEVLDPDGKISTAQISSKLKKLGLTIASRKKKGDADETFSTSPNQLEGGGLAGG 1022
Query: 362 NN-------LPRKPLHTRKRVRAFSEDQEQKIKDLFEQFKDHKKCSYMIASELDAEGTFS 520
N L + RKRV AF+EDQE +IK LFE FKDH++CSYMIA+ LD +G F+
Sbjct: 1023 VNHTSVEGSLLIQHRQKRKRVSAFNEDQEARIKVLFEDFKDHRRCSYMIANALDKDGKFT 1082
Query: 521 AVQITRKL 544
Q++RKL
Sbjct: 1083 PAQVSRKL 1090
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +2
Query: 11 PNSVLMEGMNGDKHFNKEQHSIRLQSKRIRTKRNSLVLNDELKGKINTLYERFKDDQQCC 190
PN + G+ G + + S+ +Q ++ R + ++ N++ + +I L+E FKD ++C
Sbjct: 1011 PNQLEGGGLAGGVNHTSVEGSLLIQHRQKRKRVSAF--NEDQEARIKVLFEDFKDHRRCS 1068
Query: 191 SLIAQALDENGNISAVQISRTLKKLGCNIPHKA 289
+IA ALD++G + Q+SR LK+LG +P K+
Sbjct: 1069 YMIANALDKDGKFTPAQVSRKLKQLGLCVPQKS 1101