BLASTX nr result

ID: Lithospermum22_contig00044623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044623
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI40500.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   117   1e-24

>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/107 (56%), Positives = 78/107 (72%)
 Frame = -1

Query: 322 IKSPKELNSQRKMESLIKLYLDLGDFWSATTVFFVGLIQNFLSWRSFVDDFRGFGGTPNE 143
           IK PK+ N      S+++ YL+ GDF SAT VFFVG  +N+L W SF+++F  FGG  +E
Sbjct: 55  IKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHE 114

Query: 142 ILEVFVELHNRGVIFDSKLLTIGLKICATIEEKCLGLELHACLIKRG 2
           ILEVF ELH++GV FDSK LT+ LKIC  + E  LG+E+HACL+KRG
Sbjct: 115 ILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRG 161


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/107 (55%), Positives = 76/107 (71%)
 Frame = -1

Query: 322 IKSPKELNSQRKMESLIKLYLDLGDFWSATTVFFVGLIQNFLSWRSFVDDFRGFGGTPNE 143
           IK PK+ N      S+++ YL  GDF SAT VFFVG  +N+L W SF+++F  FGG  +E
Sbjct: 55  IKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHE 114

Query: 142 ILEVFVELHNRGVIFDSKLLTIGLKICATIEEKCLGLELHACLIKRG 2
           IL VF ELH++GV FDSK LT+ LKIC  + E  LG+E+HACL+KRG
Sbjct: 115 ILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRG 161


>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/107 (48%), Positives = 75/107 (70%)
 Frame = -1

Query: 322 IKSPKELNSQRKMESLIKLYLDLGDFWSATTVFFVGLIQNFLSWRSFVDDFRGFGGTPNE 143
           IK P++ N     ++LI  YL  GDFWSA  VF+VGL +N+L W SFV++F+   G+ + 
Sbjct: 447 IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 506

Query: 142 ILEVFVELHNRGVIFDSKLLTIGLKICATIEEKCLGLELHACLIKRG 2
           +LEVF ELH +GV+FDS++ ++ LK C  + +  LG+E+H CLIKRG
Sbjct: 507 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG 553


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/107 (48%), Positives = 75/107 (70%)
 Frame = -1

Query: 322 IKSPKELNSQRKMESLIKLYLDLGDFWSATTVFFVGLIQNFLSWRSFVDDFRGFGGTPNE 143
           IK P++ N     ++LI  YL  GDFWSA  VF+VGL +N+L W SFV++F+   G+ + 
Sbjct: 57  IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 116

Query: 142 ILEVFVELHNRGVIFDSKLLTIGLKICATIEEKCLGLELHACLIKRG 2
           +LEVF ELH +GV+FDS++ ++ LK C  + +  LG+E+H CLIKRG
Sbjct: 117 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG 163


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/107 (48%), Positives = 75/107 (70%)
 Frame = -1

Query: 322 IKSPKELNSQRKMESLIKLYLDLGDFWSATTVFFVGLIQNFLSWRSFVDDFRGFGGTPNE 143
           IK P++ N     ++LI  YL  GDFWSA  VF+VGL +N+L W SFV++F+   G+ + 
Sbjct: 598 IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 657

Query: 142 ILEVFVELHNRGVIFDSKLLTIGLKICATIEEKCLGLELHACLIKRG 2
           +LEVF ELH +GV+FDS++ ++ LK C  + +  LG+E+H CLIKRG
Sbjct: 658 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG 704


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