BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044605
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
emb|CBI27939.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002514156.1| pentatricopeptide repeat-containing protein,...    95   7e-18
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat...    88   1e-15
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat...    88   1e-15

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/89 (56%), Positives = 59/89 (66%)
 Frame = +1

Query: 283 NLDIVKELKWYSEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALA 462
           + D    L+ YS ML  CA      EGKA+H Q+IKS   PD+HLW SL+N YAKCG+  
Sbjct: 121 DFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN 180

Query: 463 YGCKVLDMMPRRDVVSWTALISGFVTGGY 549
           Y CKV   +P RDVVSWTALI+GFV  GY
Sbjct: 181 YACKVFGEIPERDVVSWTALITGFVAEGY 209



 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = +1

Query: 313 YSEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKVLDMMP 492
           Y+  L  C+       GK +H + IK  D  D  +  +L++ YAKCG +    +V   MP
Sbjct: 232 YATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP 291

Query: 493 RRDVVSWTALISGFVTGG 546
           +++ VSW AL++GF   G
Sbjct: 292 KQNAVSWNALLNGFAQMG 309


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = +1

Query: 313 YSEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKVLDMMP 492
           +  +L  CA      EGKA+H Q+IKS   PD+HLW SL+N YAKCG+  Y CKV   +P
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 493 RRDVVSWTALISGFVTGGY 549
            RDVVSWTALI+GFV  GY
Sbjct: 254 ERDVVSWTALITGFVAEGY 272


>ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546612|gb|EEF48110.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 885

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 54/123 (43%), Positives = 75/123 (60%)
 Frame = +1

Query: 178 VPKKIYTSNLNVLEEKDLNIKNLRSLGDAGFGGNANLDIVKELKWYSEMLGKCAKNFWCR 357
           +P+K+ + N +++++ + N   + S               + LK YS ML +CA      
Sbjct: 64  IPRKLSSPNWSLIDKSETN--EIISFASK-----------EVLKRYSGMLRECASKGNLN 110

Query: 358 EGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKVLDMMPRRDVVSWTALISGFV 537
           EG A+H  +IKS  EPD+HLW SLIN YAKCG+LA+  KVL  M  RDVVSWTALI+G+V
Sbjct: 111 EGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERDVVSWTALIAGYV 170

Query: 538 TGG 546
           + G
Sbjct: 171 SEG 173



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +1

Query: 316 SEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKVLDMMPR 495
           S +L  CA +   REGKALH   I+   E D  L  +L++ Y+KCG      KV +M+  
Sbjct: 299 STVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEE 358

Query: 496 RDVVSWTALISGFVTGGYS 552
            D+V+W+A+I+G    G+S
Sbjct: 359 PDIVAWSAIITGLDQQGHS 377


>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/85 (51%), Positives = 54/85 (63%)
 Frame = +1

Query: 298 KELKWYSEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKV 477
           K+LK+YS ML +CA        KA+H  ++K    PD+HLW SL+N YAKC   AY   V
Sbjct: 110 KKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLV 169

Query: 478 LDMMPRRDVVSWTALISGFVTGGYS 552
           L  MP RDVVSWTALI G V  G++
Sbjct: 170 LAKMPDRDVVSWTALIQGLVAEGFA 194


>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/85 (51%), Positives = 54/85 (63%)
 Frame = +1

Query: 298 KELKWYSEMLGKCAKNFWCREGKALHCQLIKSEDEPDAHLWGSLINFYAKCGALAYGCKV 477
           K+LK+YS ML +CA        KA+H  ++K    PD+HLW SL+N YAKC   AY   V
Sbjct: 110 KKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLV 169

Query: 478 LDMMPRRDVVSWTALISGFVTGGYS 552
           L  MP RDVVSWTALI G V  G++
Sbjct: 170 LAKMPDRDVVSWTALIQGLVAEGFA 194