BLASTX nr result

ID: Lithospermum22_contig00044575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044575
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
ref|XP_004173450.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
ref|XP_004171410.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -1

Query: 276 MSACRNAGLVELGSSLFESISLDYRMKPSPHNYGCLVDLLSRNGFLDNAKKVILQMPYAP 97
           +SAC + GLVE G   F+S++LDY M PSP NYGCLVDL SRNGFL++AK +I  MP+ P
Sbjct: 595 ISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPP 654

Query: 96  WPAIWRSFLHGCIIHGNRELAAWASREAFQ 7
           WPAIWRS L+GC IHGN+EL  WA+++  Q
Sbjct: 655 WPAIWRSLLNGCRIHGNKELGEWAAKKLLQ 684


>ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -1

Query: 276 MSACRNAGLVELGSSLFESISLDYRMKPSPHNYGCLVDLLSRNGFLDNAKKVILQMPYAP 97
           +SAC + GLVE G   F+S++LDY M PSP NYGCLVDL SRNGFL++AK +I  MP+ P
Sbjct: 571 ISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPP 630

Query: 96  WPAIWRSFLHGCIIHGNRELAAWASREAFQ 7
           WPAIWRS L+GC IHGN+EL  WA+++  Q
Sbjct: 631 WPAIWRSLLNGCRIHGNKELGEWAAKKLLQ 660


>ref|XP_004173450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 453

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -1

Query: 276 MSACRNAGLVELGSSLFESISLDYRMKPSPHNYGCLVDLLSRNGFLDNAKKVILQMPYAP 97
           +SAC + GLVE G SLF+++  DY M PS  NYGCLVD+LSRNGFL +A+ +I  MP++P
Sbjct: 316 ISACGHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSP 375

Query: 96  WPAIWRSFLHGCIIHGNRELAAWASRE 16
           WPAI RS L GC I+GNREL  W + +
Sbjct: 376 WPAILRSLLSGCRIYGNRELGQWTAEK 402


>ref|XP_004171410.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 172

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -1

Query: 276 MSACRNAGLVELGSSLFESISLDYRMKPSPHNYGCLVDLLSRNGFLDNAKKVILQMPYAP 97
           +SAC + GLVE G SLF+++  DY M PS  NYGCLVD+LSRNGFL +A+ +I  MP++P
Sbjct: 35  ISACGHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSP 94

Query: 96  WPAIWRSFLHGCIIHGNRELAAWASRE 16
           WPAI RS L GC I+GNREL  W + +
Sbjct: 95  WPAILRSLLSGCRIYGNRELGQWTAEK 121


>ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 638

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -1

Query: 276 MSACRNAGLVELGSSLFESISLDYRMKPSPHNYGCLVDLLSRNGFLDNAKKVILQMPYAP 97
           +SAC + GLVE G SLF+++  DY M PS  NYGCLVD+LSRNGFL +A+ +I  MP++P
Sbjct: 501 ISACGHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSP 560

Query: 96  WPAIWRSFLHGCIIHGNRELAAWASRE 16
           WPAI RS L GC I+GNREL  W + +
Sbjct: 561 WPAILRSLLSGCRIYGNRELGQWTAEK 587


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