BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044522
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...   188   3e-46
ref|XP_003591206.1| Pentatricopeptide repeat-containing protein ...   175   4e-42

>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  201 bits (510), Expect = 7e-50
 Identities = 94/156 (60%), Positives = 120/156 (76%)
 Frame = -1

Query: 470 ICTSLNQLPYANLVFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFT 291
           IC SLN++ YAN +FK  +NP I LFN++IKGYSL+ PFE S +LFS M+NRGIWPDE+T
Sbjct: 50  ICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYT 109

Query: 290 LTPLLKACANIRELTLGQGVQKIVFVLGFWRFGCIRVSVVELYCECGKMDDAWKVFDEMS 111
           L PLLKAC+++  L LG+ + K V V+GF  F  IR+ V+ELY  CG M+DA KVFDEM 
Sbjct: 110 LAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMY 169

Query: 110 HRDVIIWNLMLHGYCRIGDVGTGFVLFRRMGERTVV 3
            RDVI+WNLM+HG+C+ GDV  G  LFR+M +R+VV
Sbjct: 170 QRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRSVV 205



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = -1

Query: 431 VFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFTLTPLLKACANIRE 252
           +F+  +  ++  +N +I   +       ++ LF  M + G  PDE T+  +L  CA +  
Sbjct: 195 LFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGS 254

Query: 251 LTLGQGVQKIVFVLGFWR-FGCIRVSVVELYCECGKMDDAWKVFDEMSHRDVIIWNLMLH 75
           + +G+ +       G +R F  +  ++V+ Y + G  + A +VFDEM  ++VI WN ++ 
Sbjct: 255 VDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLIS 314

Query: 74  GYCRIGDVGTGFVLFRRM 21
           G    G+   G  L   M
Sbjct: 315 GLALNGNGELGVELLEEM 332


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  199 bits (506), Expect = 2e-49
 Identities = 89/156 (57%), Positives = 122/156 (78%)
 Frame = -1

Query: 470 ICTSLNQLPYANLVFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFT 291
           +C +L+++ YANLVF   +NPN+ LFNS+IKGYSL  P ENS+ LFS M+NRGIWPDEFT
Sbjct: 50  VCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFT 109

Query: 290 LTPLLKACANIRELTLGQGVQKIVFVLGFWRFGCIRVSVVELYCECGKMDDAWKVFDEMS 111
             PLLK+C+ I +  +G+GV  +V V+GF RF  IR+ +++LY  CG+M+DA KVFDEM 
Sbjct: 110 FAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEML 169

Query: 110 HRDVIIWNLMLHGYCRIGDVGTGFVLFRRMGERTVV 3
            RDVI+WN+M+ G+C++GD+  GF LFR+M +R+VV
Sbjct: 170 DRDVIVWNMMIRGFCKVGDIEMGFRLFRQMRDRSVV 205



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
 Frame = -1

Query: 431 VFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFTLTPLLKACANIRE 252
           +F+  ++ ++  +NS+I G         +++LF  M + G  PD+ T+  +L  CA +  
Sbjct: 195 LFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGA 254

Query: 251 LTLGQGVQKIVFVLGFWR-FGCIRVSVVELYCECGKMDDAWKVFDEMSHRDVIIWNLMLH 75
           + +G+ +          R F  +  S+V+ YC+CG ++ AW+VF+EM  ++V+ WN M+ 
Sbjct: 255 VDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMIS 314

Query: 74  GYCRIGDVGTGFVLFRRM 21
           G    G    G  LF  M
Sbjct: 315 GLTFNGKGELGADLFEEM 332


>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/156 (57%), Positives = 115/156 (73%)
 Frame = -1

Query: 470 ICTSLNQLPYANLVFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFT 291
           +C S N++ YA+ +F    NPNIFLFNSIIK +SL  PF  S+ LFS M+N  I PD++T
Sbjct: 50  VCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYT 109

Query: 290 LTPLLKACANIRELTLGQGVQKIVFVLGFWRFGCIRVSVVELYCECGKMDDAWKVFDEMS 111
             PLLK+CAN+ E +LGQ V   VF  GF+ FG IR+ VVELY  C KM+DAWK+FDEMS
Sbjct: 110 FAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMS 169

Query: 110 HRDVIIWNLMLHGYCRIGDVGTGFVLFRRMGERTVV 3
           HRDV++WNLM+ G+C+ G+V  G  LFR+M ER++V
Sbjct: 170 HRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSLV 205



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
 Frame = -1

Query: 431 VFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFTLTPLLKACANIRE 252
           +F+     ++  +N+II   + +     +++LF  M   G  PDE T+  +L  C+ +  
Sbjct: 195 LFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGA 254

Query: 251 LTLGQGVQKIVFVLG-FWRFGCIRVSVVELYCECGKMDDAWKVFDEMSHRDVIIWNLMLH 75
           L +GQ +       G       +  S+++ YC+CG ++ A+ +F +M+ + V+ WN ++ 
Sbjct: 255 LEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIIL 314

Query: 74  GYCRIGDVGTGFVLFRRM 21
           G+   G       LF  M
Sbjct: 315 GFALNGKGEFAIDLFMEM 332


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score =  188 bits (478), Expect = 3e-46
 Identities = 88/156 (56%), Positives = 113/156 (72%)
 Frame = -1

Query: 470 ICTSLNQLPYANLVFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFT 291
           +C S N++PYAN VF    NPNI  FN+++KGYSL  PFE S+  FS M+ RGIWPDE+T
Sbjct: 208 VCGSENKMPYANRVFLQSVNPNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYT 267

Query: 290 LTPLLKACANIRELTLGQGVQKIVFVLGFWRFGCIRVSVVELYCECGKMDDAWKVFDEMS 111
             PLLKAC+++ +L LGQ + K V ++GF  F  I++ VVELY  CG ++D+ KVFDEM 
Sbjct: 268 FAPLLKACSSLYDLKLGQCIHKDVIMIGFECFCSIQIGVVELYANCGLLEDSKKVFDEMR 327

Query: 110 HRDVIIWNLMLHGYCRIGDVGTGFVLFRRMGERTVV 3
            RD I+WNLM+ GYCR GDV  G  LFR+M ER+VV
Sbjct: 328 ERDSIVWNLMIRGYCRRGDVNMGLYLFRKMSERSVV 363


>ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480254|gb|AES61457.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 490

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/157 (50%), Positives = 112/157 (71%), Gaps = 1/157 (0%)
 Frame = -1

Query: 470 ICTSLNQLPYANLVFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMR-NRGIWPDEF 294
           +CTSL+Q+PYA  +F H  +PNI LFNSIIK +S  PPF  S   F+LM+    I PD F
Sbjct: 50  VCTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNF 109

Query: 293 TLTPLLKACANIRELTLGQGVQKIVFVLGFWRFGCIRVSVVELYCECGKMDDAWKVFDEM 114
           T  PLLKA + +R+  LGQ +   V  LGF+R   + + ++E+Y  CGKM+DA KVFDEM
Sbjct: 110 TFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEM 169

Query: 113 SHRDVIIWNLMLHGYCRIGDVGTGFVLFRRMGERTVV 3
            HR+V++WN+M++G+C++GD+  G  LF+RMG+R+VV
Sbjct: 170 LHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVV 206



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
 Frame = -1

Query: 431 VFKHFKNPNIFLFNSIIKGYSLHPPFENSVKLFSLMRNRGIWPDEFTLTPLLKACANIRE 252
           +FK     ++  +N +I   +       +  +F  M  +G  PD+ TL  +L  CA + +
Sbjct: 196 LFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGD 255

Query: 251 LTLGQGVQKIVFVLGFWR-FGCIRVSVVELYCECGKMDDAWKVFDEMSHRDVIIWNLMLH 75
           +  G+ +       G  R    +  S+V+ YC+CG ++ AWKVF+EM+ ++V+ WN M+ 
Sbjct: 256 VDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMIS 315

Query: 74  GYCRIGDVGTGFVLFRRMGERTV 6
           G    G    G  LF +M  + V
Sbjct: 316 GLGLNGKGELGVELFEKMARKGV 338