BLASTX nr result

ID: Lithospermum22_contig00044512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044512
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   297   1e-78
ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   282   4e-74
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   281   9e-74
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   277   1e-72

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  297 bits (760), Expect = 1e-78
 Identities = 141/206 (68%), Positives = 164/206 (79%)
 Frame = -2

Query: 620 FDPKSEYMASIDAFGSVIIWELQSGRIIHDLKGIAPDTGSDLSVKNVVEWSPDGEMLAVP 441
           FDP  EY+AS+D+ G+VI WEL SG  +H LKGIAPDTGSDLSV N + WSPDGE LAVP
Sbjct: 153 FDPNGEYLASVDSIGTVIQWELHSGTALHILKGIAPDTGSDLSVLNALSWSPDGETLAVP 212

Query: 440 GRLNDVVMYDRDTAEKKSSFIGDHMQPVCFLSWSPNGRYMATSGLDNQVLIWDVKKNQDI 261
           G  NDVVMYDRDTAEK  S  GDH+QP+CFLSWSPNG+YMAT+GLD Q+LIWDV + QDI
Sbjct: 213 GLRNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATAGLDRQILIWDVDQRQDI 272

Query: 260 DRHKFENRVTSIAWKPHGNALAVIDSMGRFGVWESAVPPSMKSPTEDIPLIKTGNGFQLF 81
           DR KF++R+  +AWKP+GNALAVID MG++GVWESAVP SMKSPTED+P +++ N   L 
Sbjct: 273 DRQKFDDRICCMAWKPNGNALAVIDVMGKYGVWESAVPSSMKSPTEDVPSLQSKNSNGLL 332

Query: 80  XXXXXXXEPSISGSFSDPGEDSHGES 3
                  EPS SGS SD GEDSHGES
Sbjct: 333 LFDEDEQEPSASGSLSDLGEDSHGES 358


>ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|222858632|gb|EEE96179.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  286 bits (732), Expect = 2e-75
 Identities = 140/206 (67%), Positives = 163/206 (79%)
 Frame = -2

Query: 620 FDPKSEYMASIDAFGSVIIWELQSGRIIHDLKGIAPDTGSDLSVKNVVEWSPDGEMLAVP 441
           FDP +EY+A++D+ G+V+ WELQSG I+H LKG+AP+  SD S  NVV WSPDGE LAVP
Sbjct: 37  FDPINEYLATVDSVGTVLFWELQSGGILHTLKGVAPNIISDTSFMNVVSWSPDGETLAVP 96

Query: 440 GRLNDVVMYDRDTAEKKSSFIGDHMQPVCFLSWSPNGRYMATSGLDNQVLIWDVKKNQDI 261
           G  NDVVMYDRDTAEK  S  GDH+QPVC+LSWSPNG+YMATSGLD Q+LIWDV K QDI
Sbjct: 97  GLRNDVVMYDRDTAEKLFSLRGDHVQPVCYLSWSPNGKYMATSGLDRQILIWDVDKKQDI 156

Query: 260 DRHKFENRVTSIAWKPHGNALAVIDSMGRFGVWESAVPPSMKSPTEDIPLIKTGNGFQLF 81
           DR KFE+R++ +AWKP GNALAVID MG++G+WES VP SMKSPTEDIP +K  NG  LF
Sbjct: 157 DRQKFEDRISGMAWKPIGNALAVIDVMGKYGLWESVVPSSMKSPTEDIPSLKNINGVLLF 216

Query: 80  XXXXXXXEPSISGSFSDPGEDSHGES 3
                  EPSISG  S+ GEDS GES
Sbjct: 217 ---DEDPEPSISGGLSEFGEDSLGES 239


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  282 bits (721), Expect = 4e-74
 Identities = 138/206 (66%), Positives = 159/206 (77%)
 Frame = -2

Query: 620 FDPKSEYMASIDAFGSVIIWELQSGRIIHDLKGIAPDTGSDLSVKNVVEWSPDGEMLAVP 441
           FDP SEY+AS+D+ G+VIIWELQSG IIH+LKGIAP+TGSD SV NV+ WSPDGE LAVP
Sbjct: 155 FDPNSEYLASVDSIGTVIIWELQSGSIIHNLKGIAPNTGSDPSVMNVLGWSPDGETLAVP 214

Query: 440 GRLNDVVMYDRDTAEKKSSFIGDHMQPVCFLSWSPNGRYMATSGLDNQVLIWDVKKNQDI 261
           G  NDVVMYDRDTAEK  S  GDH QP+CFLSWSPNG+YMATS LD Q+LIWDV +  DI
Sbjct: 215 GLRNDVVMYDRDTAEKLFSLRGDHTQPICFLSWSPNGKYMATSSLDRQILIWDVDQKLDI 274

Query: 260 DRHKFENRVTSIAWKPHGNALAVIDSMGRFGVWESAVPPSMKSPTEDIPLIKTGNGFQLF 81
           DR KF+ R+  +AWKP GNALAVID MG++GVWES VP SMK PTEDIP +++ N   L 
Sbjct: 275 DRQKFDERICCMAWKPIGNALAVIDVMGKYGVWESVVPSSMKPPTEDIPKLQSRNSNGLL 334

Query: 80  XXXXXXXEPSISGSFSDPGEDSHGES 3
                  EPS   + SD GEDS+ ES
Sbjct: 335 LFDEEDEEPSAHENSSDLGEDSYHES 360


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score =  281 bits (718), Expect = 9e-74
 Identities = 137/202 (67%), Positives = 158/202 (78%), Gaps = 2/202 (0%)
 Frame = -2

Query: 620 FDPKSEYMASIDAFGSVIIWELQSGRIIHDLKGIAPDTGSDLSVKNVVEWSPDGEMLAVP 441
           FDP  EY+AS+D+ G+VI WELQSG ++H LK +AP TGSD SV NVV WSPDGE LAVP
Sbjct: 155 FDPNGEYLASVDSTGTVIFWELQSGTVLHTLKAVAPHTGSDTSVMNVVSWSPDGETLAVP 214

Query: 440 GRLNDVVMYDRDTAEKKSSFIGDHMQPVCFLSWSPNGRYMATSGLDNQVLIWDVKKNQDI 261
           G  NDVVMYDRDTAEK  S  GDH+QP+CFLSWSPNGRYMATSGLD Q+LIWDV K QDI
Sbjct: 215 GLRNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGRYMATSGLDKQILIWDVDKKQDI 274

Query: 260 DRHKFENRVTSIAWKPHGNALAVIDSMGRFGVWESAVPPSMKSPTEDIPLI--KTGNGFQ 87
           DR KF++R++ +AWKP GNALAVID  G++G+WES VP SMKSPT+DIP +  +  NG  
Sbjct: 275 DRQKFDDRISCMAWKPIGNALAVIDVTGKYGLWESVVPSSMKSPTDDIPNLQSRNNNGLL 334

Query: 86  LFXXXXXXXEPSISGSFSDPGE 21
           LF       EPSISGS SD GE
Sbjct: 335 LF-EEEEDDEPSISGSLSDLGE 355


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  277 bits (708), Expect = 1e-72
 Identities = 132/206 (64%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
 Frame = -2

Query: 620 FDPKSEYMASIDAFGSVIIWELQSGRIIHDLKGIAPDTGSDLSVKNVVEWSPDGEMLAVP 441
           FDP  EY+AS+D+ G+VIIWEL SG+ +H+LKGIAPDTG DL   NV+ WSPDGE LA+P
Sbjct: 154 FDPNGEYLASLDSIGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLCWSPDGETLAIP 213

Query: 440 GRLNDVVMYDRDTAEKKSSFIGDHMQPVCFLSWSPNGRYMATSGLDNQVLIWDVKKNQDI 261
           G  NDVVMYDRDTAEK  +  GDH QP+CFL WSPNG+YMATS LD Q+LIWDV K QDI
Sbjct: 214 GLKNDVVMYDRDTAEKLFTLRGDHTQPICFLCWSPNGKYMATSSLDKQILIWDVDKKQDI 273

Query: 260 DRHKFENRVTSIAWKPHGNALAVIDSMGRFGVWESAVPPSMKSPTEDIPLI-KTGNGFQL 84
           DR KF+ RV  + WKP GNALAVID MG++G+W++ +P SMKSPTEDIP++ K  NG  L
Sbjct: 274 DRQKFDERVCCMTWKPIGNALAVIDVMGKYGIWDNVIPSSMKSPTEDIPMLGKNSNGLLL 333

Query: 83  FXXXXXXXEPSISGSFSDPGEDSHGE 6
           F         S+SGS SD GE+S+GE
Sbjct: 334 FDEEEEDN--SVSGSLSDLGENSNGE 357


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