BLASTX nr result

ID: Lithospermum22_contig00044481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044481
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171008.1| PREDICTED: AT-rich interactive domain-contai...    59   5e-07
ref|XP_004138586.1| PREDICTED: AT-rich interactive domain-contai...    59   5e-07
ref|NP_182128.2| ARID/BRIGHT AND ELM2 DNA-binding domain-contain...    55   8e-06
gb|AAC62899.1| hypothetical protein [Arabidopsis thaliana]             55   8e-06

>ref|XP_004171008.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Cucumis sativus]
          Length = 395

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/58 (46%), Positives = 39/58 (67%)
 Frame = -3

Query: 175 EPALIGRDYQAEVLKWGEGTDVSDLNFLGTQIFPLEANQQNKYLIERERVGKGRHDTC 2
           +P  +G DYQA V +W      SDL +LGTQ +PL+   +N+YL+ER+ +G+GR D C
Sbjct: 196 KPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKG-RNRYLVERDPIGRGRRDPC 252


>ref|XP_004138586.1| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Cucumis sativus]
          Length = 395

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/58 (46%), Positives = 39/58 (67%)
 Frame = -3

Query: 175 EPALIGRDYQAEVLKWGEGTDVSDLNFLGTQIFPLEANQQNKYLIERERVGKGRHDTC 2
           +P  +G DYQA V +W      SDL +LGTQ +PL+   +N+YL+ER+ +G+GR D C
Sbjct: 196 KPVPLGSDYQARVPEWNGVISKSDLKWLGTQDWPLKKG-RNRYLVERDPIGRGRRDPC 252


>ref|NP_182128.2| ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein
           [Arabidopsis thaliana]
           gi|75146722|sp|Q84JT7.1|ARID1_ARATH RecName:
           Full=AT-rich interactive domain-containing protein 1;
           Short=ARID domain-containing protein 1; AltName:
           Full=ARID and ELM2 domain-containing protein 1
           gi|28393187|gb|AAO42024.1| unknown protein [Arabidopsis
           thaliana] gi|28827512|gb|AAO50600.1| unknown protein
           [Arabidopsis thaliana] gi|330255541|gb|AEC10635.1|
           ARID/BRIGHT AND ELM2 DNA-binding domain-containing
           protein [Arabidopsis thaliana]
          Length = 562

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 190 DRYSQEPALIGRDYQAEVLKWGEGTDVSDLNFLGTQIFPLEANQ-QNKYLIERERVGKGR 14
           D   +  AL+G  +QA+V +W   T  SD  +LGT+I+PL   Q +   LIER+R+GKGR
Sbjct: 353 DEEDRPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGR 412

Query: 13  HDTC 2
            D C
Sbjct: 413 QDPC 416


>gb|AAC62899.1| hypothetical protein [Arabidopsis thaliana]
          Length = 576

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 190 DRYSQEPALIGRDYQAEVLKWGEGTDVSDLNFLGTQIFPLEANQ-QNKYLIERERVGKGR 14
           D   +  AL+G  +QA+V +W   T  SD  +LGT+I+PL   Q +   LIER+R+GKGR
Sbjct: 367 DEEDRPCALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKANLLIERDRIGKGR 426

Query: 13  HDTC 2
            D C
Sbjct: 427 QDPC 430


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