BLASTX nr result

ID: Lithospermum22_contig00044407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044407
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus...    90   2e-16
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    90   2e-16
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...    88   8e-16
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...    88   8e-16
emb|CBI30552.3| unnamed protein product [Vitis vinifera]               88   8e-16

>ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus communis]
           gi|223527968|gb|EEF30052.1| ubiquitin ligase E3 alpha,
           putative [Ricinus communis]
          Length = 2073

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
 Frame = +2

Query: 86  GVCGELLGKYNIGNDIGYQCRTCQQSRTALICVPCFKNGNHAGHDHSIIFTEFGGCGCG- 262
           GVCG + G     NDI Y+CRTC+   T  ICVPCF+NGNH  HD+SII+T  G C CG 
Sbjct: 120 GVCGAVWGN----NDIAYRCRTCEHDPTCAICVPCFQNGNHKDHDYSIIYTGGGCCDCGD 175

Query: 263 VSALK-------HQGAEMIPKLPEKISN 325
           V+A K       H+GAE I  LPE+ +N
Sbjct: 176 VTAWKREGFCSSHKGAEQIQPLPEEYAN 203


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
 Frame = +2

Query: 71  SLCKSGVCGELLGKYNIGNDIGYQCRTCQQSRTALICVPCFKNGNHAGHDHSIIFTEFGG 250
           S+ + GVCG + G     +DI Y+CRTC+   T  ICVPCF+NGNH GHD+ +I+T  G 
Sbjct: 112 SVGQRGVCGSVWGN----SDIAYRCRTCEHDPTCAICVPCFENGNHKGHDYFVIYTGGGC 167

Query: 251 CGCG-VSA-------LKHQGAEMIPKLPEKISN 325
           C CG V+A       L H+GAE I  LPE+ +N
Sbjct: 168 CDCGDVTAWKREGFCLMHKGAEQIQPLPEEFAN 200


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
 Frame = +2

Query: 86  GVCGELLGKYNIGNDIGYQCRTCQQSRTALICVPCFKNGNHAGHDHSIIFTEFGGCGCG- 262
           GVCG + G     NDI Y+CRTC+   T  ICVPCF+NGNH  HD+S+I+T  G C CG 
Sbjct: 120 GVCGSVWGH----NDIAYRCRTCEHDPTCAICVPCFQNGNHKDHDYSVIYTGGGCCDCGD 175

Query: 263 VSA-------LKHQGAEMIPKLPEKIS 322
           V+A        KH+GAE I  LPE+ +
Sbjct: 176 VTAWKREGFCSKHKGAEQIQPLPEEFA 202


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
 Frame = +2

Query: 86  GVCGELLGKYNIGNDIGYQCRTCQQSRTALICVPCFKNGNHAGHDHSIIFTEFGGCGCG- 262
           GVCG + G     +DI Y+CRTC+   T  ICVPCF+NGNH GHD+ +I+T  G C CG 
Sbjct: 117 GVCGSVWGN----SDIAYRCRTCEHDPTCAICVPCFENGNHKGHDYFVIYTGGGCCDCGD 172

Query: 263 VSALK-------HQGAEMIPKLPEKISN 325
           V+A K       H+GAE +  LPE+ +N
Sbjct: 173 VTAWKREGFCSMHKGAEQMQPLPEEFAN 200


>emb|CBI30552.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
 Frame = +2

Query: 86  GVCGELLGKYNIGNDIGYQCRTCQQSRTALICVPCFKNGNHAGHDHSIIFTEFGGCGCG- 262
           GVCG + G     NDI Y+CRTC+   T  ICVPCF+NGNH  HD+S+I+T  G C CG 
Sbjct: 122 GVCGSVWGH----NDIAYRCRTCEHDPTCAICVPCFQNGNHKDHDYSVIYTGGGCCDCGD 177

Query: 263 VSA-------LKHQGAEMIPKLPEKIS 322
           V+A        KH+GAE I  LPE+ +
Sbjct: 178 VTAWKREGFCSKHKGAEQIQPLPEEFA 204


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