BLASTX nr result

ID: Lithospermum22_contig00044364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044364
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    59   3e-07
ref|XP_003571272.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    58   9e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    57   2e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    57   2e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    57   2e-06

>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = -1

Query: 132 WKTLSLSKNQGGLEFRDMHHFNQALLCKQIWRLLTEPDSSLAKV 1
           W+ L+LSK +GGL FRD++HFN A+L +Q WR+L EPD+   +V
Sbjct: 265 WEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRV 308


>ref|XP_003571272.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Brachypodium distachyon]
          Length = 593

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -1

Query: 132 WKTLSLSKNQGGLEFRDMHHFNQALLCKQIWRLLTEPDSSLAKV 1
           W  +   KN GGL+FRDM  FNQALL +Q+WRL+ +PDS  A++
Sbjct: 59  WDVMLRPKNMGGLDFRDMQTFNQALLARQVWRLIDKPDSLCARL 102


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -1

Query: 144  HVDYWKTLSLSKNQGGLEFRDMHHFNQALLCKQIWRLLTEPDSSLAKV 1
            H   WK+L+ SK+ GGL F+D+  FNQALL +Q WRL+  PDS  A+V
Sbjct: 1206 HWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARV 1253


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -1

Query: 144  HVDYWKTLSLSKNQGGLEFRDMHHFNQALLCKQIWRLLTEPDSSLAKV 1
            H   WK+L+ SK+ GGL F+D+  FNQALL +Q WRL+  PDS  A+V
Sbjct: 1234 HWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARV 1281


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = -1

Query: 132 WKTLSLSKNQGGLEFRDMHHFNQALLCKQIWRLLTEPDSSLAKV 1
           W  L  SK+ GGL FR++  FN ALL KQ+WRL+T PDS  AKV
Sbjct: 625 WDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKV 668


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