BLASTX nr result

ID: Lithospermum22_contig00044360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044360
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   121   2e-30
ref|YP_006460152.1| NADH dehydrogenase subunit 2 (mitochondrion)...   110   1e-22
ref|YP_173350.1| NADH dehydrogenase subunit 2 [Nicotiana tabacum]     109   3e-22
emb|CAA63783.1| NADH dehydrogenase subunit II [Solanum tuberosum]     109   3e-22
ref|YP_006291809.1| nad2 gene product (mitochondrion) [Daucus ca...   109   3e-22

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
            gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
            [Medicago truncatula]
          Length = 1094

 Score =  121 bits (304), Expect(2) = 2e-30
 Identities = 68/100 (68%), Positives = 69/100 (69%)
 Frame = +3

Query: 63   VIRTCPERASHRGKSSW*AV*WATISCGSERTQLLVSSPLVSGWTLFTLFYYIRLAKRMF 242
            VIRTCPE                        TQLLVS+P   G   FTLFYYIRLAKRMF
Sbjct: 1010 VIRTCPE------------------------TQLLVSTPFRGG--PFTLFYYIRLAKRMF 1043

Query: 243  FDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 362
            FDTPRTWILYEPMDRDKSLLLAMTSSFITS FPYPSPLFS
Sbjct: 1044 FDTPRTWILYEPMDRDKSLLLAMTSSFITSSFPYPSPLFS 1083



 Score = 35.8 bits (81), Expect(2) = 2e-30
 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
 Frame = +2

Query: 2    NNHIENAPNP-TPSFVEPCIV 61
            NN+IEN PNP T SFVEPCIV
Sbjct: 990  NNNIENVPNPPTLSFVEPCIV 1010


>ref|YP_006460152.1| NADH dehydrogenase subunit 2 (mitochondrion) [Mimulus guttatus]
           gi|340007676|gb|AEK26540.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Mimulus guttatus]
          Length = 488

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/79 (72%), Positives = 62/79 (78%)
 Frame = +3

Query: 126 WATISCGSERTQLLVSSPLVSGWTLFTLFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLL 305
           +A ++CG+    L+     V G      FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLL
Sbjct: 404 FAALACGAYLLALVGVVTSVIG-----RFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLL 458

Query: 306 AMTSSFITSFFPYPSPLFS 362
           AMTSSFITSFFPYPSPLFS
Sbjct: 459 AMTSSFITSFFPYPSPLFS 477


>ref|YP_173350.1| NADH dehydrogenase subunit 2 [Nicotiana tabacum]
          Length = 488

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = +3

Query: 210 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 362
           FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS
Sbjct: 427 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 477


>emb|CAA63783.1| NADH dehydrogenase subunit II [Solanum tuberosum]
          Length = 306

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = +3

Query: 210 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 362
           FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS
Sbjct: 245 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 295


>ref|YP_006291809.1| nad2 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082017|gb|AEY81209.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 488

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = +3

Query: 210 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 362
           FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS
Sbjct: 427 FYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITSFFPYPSPLFS 477


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