BLASTX nr result

ID: Lithospermum22_contig00044357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044357
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004891651.1| ycf2 gene product (chloroplast) [Nicotiana u...   148   4e-34
ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|re...   147   7e-34
gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba]            147   7e-34
gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|34080...   147   7e-34
gb|ABQ14917.1| Ycf2 [Rhodoleia championii]                            147   7e-34

>ref|YP_004891651.1| ycf2 gene product (chloroplast) [Nicotiana undulata]
            gi|351653958|ref|YP_004891685.1| ycf2 gene product
            (chloroplast) [Nicotiana undulata]
            gi|347453954|gb|AEO95612.1| hypothetical chloroplast RF21
            (chloroplast) [Nicotiana undulata]
            gi|347453984|gb|AEO95642.1| hypothetical chloroplast RF21
            (chloroplast) [Nicotiana undulata]
            gi|347454065|gb|AEO95722.1| hypothetical chloroplast RF21
            [synthetic construct] gi|347454093|gb|AEO95750.1|
            hypothetical chloroplast RF21 [synthetic construct]
          Length = 2280

 Score =  148 bits (374), Expect = 4e-34
 Identities = 69/81 (85%), Positives = 76/81 (93%)
 Frame = -1

Query: 245  EARQTGNSTIKKCIKRGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 66
            E R+  +  +KKC+++GQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD
Sbjct: 1194 EKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 1253

Query: 65   TFSDLLPILSSSQKWVSIFHD 3
            TFSDLLPILSSSQK+VSIFHD
Sbjct: 1254 TFSDLLPILSSSQKFVSIFHD 1274


>ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|ref|YP_398942.1| Ycf2
            [Nicotiana tomentosiformis]
            gi|109896303|sp|Q33BV3.1|YCF2_NICTO RecName: Full=Protein
            ycf2 gi|80750971|dbj|BAE48047.1| Ycf2 protein [Nicotiana
            tomentosiformis] gi|80751006|dbj|BAE48082.1| Ycf2 protein
            [Nicotiana tomentosiformis]
          Length = 2280

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = -1

Query: 245  EARQTGNSTIKKCIKRGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 66
            E R+  +  +KKC+++GQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNF+FLD
Sbjct: 1194 EKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFIFLD 1253

Query: 65   TFSDLLPILSSSQKWVSIFHD 3
            TFSDLLPILSSSQK+VSIFHD
Sbjct: 1254 TFSDLLPILSSSQKFVSIFHD 1274


>gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba]
          Length = 2258

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = -1

Query: 245  EARQTGNSTIKKCIKRGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 66
            E R+  +  +KKC+++GQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNF+FLD
Sbjct: 1183 EKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFIFLD 1242

Query: 65   TFSDLLPILSSSQKWVSIFHD 3
            TFSDLLPILSSSQK+VSIFHD
Sbjct: 1243 TFSDLLPILSSSQKFVSIFHD 1263


>gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|340807055|gb|AEK71663.1|
            hypothetical chloroplast RF2 [Antirrhinum majus]
          Length = 2274

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = -1

Query: 245  EARQTGNSTIKKCIKRGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 66
            E R+  +  +KKC+++GQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNF+FLD
Sbjct: 1192 EKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFIFLD 1251

Query: 65   TFSDLLPILSSSQKWVSIFHD 3
            TFSDLLPILSSSQK+VSIFHD
Sbjct: 1252 TFSDLLPILSSSQKFVSIFHD 1272


>gb|ABQ14917.1| Ycf2 [Rhodoleia championii]
          Length = 2294

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = -1

Query: 245  EARQTGNSTIKKCIKRGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFLFLD 66
            E R+  +  +KKC+++GQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNF+FLD
Sbjct: 1197 EKRKKRSLCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNFIFLD 1256

Query: 65   TFSDLLPILSSSQKWVSIFHD 3
            TFSDLLPILSSSQK+VSIFHD
Sbjct: 1257 TFSDLLPILSSSQKFVSIFHD 1277


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