BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044348
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   164   5e-39
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   157   8e-37
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   156   2e-36
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ...   156   2e-36

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/112 (66%), Positives = 98/112 (87%)
 Frame = +1

Query: 4   EMALKMFLRIKKEFLVKASVRSFNTLLNALIQNKEFDLVYVLFKNCRKKFDIVPNVFTCN 183
           ++A++ FLRI   F ++ SVRSFNTLLN L+QNK FDLV+++FKNCRKKF IVPNVFTCN
Sbjct: 187 KLAIRTFLRIPS-FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCN 245

Query: 184 LLIKALCKKGDVEGAIRILDEIPGMGMVPNVVSYTTVLGGYVARGDMAGSKR 339
           +L+KALCKK D++ AIR+L+E+P MG +PNVV+YTT+LGGYV++GDM G++R
Sbjct: 246 ILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARR 297


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/112 (66%), Positives = 98/112 (87%)
 Frame = +1

Query: 4   EMALKMFLRIKKEFLVKASVRSFNTLLNALIQNKEFDLVYVLFKNCRKKFDIVPNVFTCN 183
           ++A++ FLRI   F ++ SVRSFNTLLN L+QNK FDLV+++FKNCRKKF IVPNVFTCN
Sbjct: 187 KLAIRTFLRIPS-FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCN 245

Query: 184 LLIKALCKKGDVEGAIRILDEIPGMGMVPNVVSYTTVLGGYVARGDMAGSKR 339
           +L+KALCKK D++ AIR+L+E+P MG +PNVV+YTT+LGGYV++GDM G++R
Sbjct: 246 ILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARR 297


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  157 bits (397), Expect = 8e-37
 Identities = 70/112 (62%), Positives = 94/112 (83%)
 Frame = +1

Query: 4   EMALKMFLRIKKEFLVKASVRSFNTLLNALIQNKEFDLVYVLFKNCRKKFDIVPNVFTCN 183
           + AL+ F+RI+ +F V+ SVRS NTLLNA +QNK +DLV+ +FKNCR K+ ++PNVFTCN
Sbjct: 147 DFALRTFIRIQ-DFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCN 205

Query: 184 LLIKALCKKGDVEGAIRILDEIPGMGMVPNVVSYTTVLGGYVARGDMAGSKR 339
           +LIKALCKK DVE A+++LDE+P MGM+PNVV+YTT+LGGY +RGDM  + +
Sbjct: 206 ILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANK 257


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/112 (65%), Positives = 93/112 (83%)
 Frame = +1

Query: 4   EMALKMFLRIKKEFLVKASVRSFNTLLNALIQNKEFDLVYVLFKNCRKKFDIVPNVFTCN 183
           E ++++FLRI  +F VK SVRS NTLLN LIQN+ FDLV+ +FKN ++ F I PN+FTCN
Sbjct: 137 ESSMRIFLRIP-DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195

Query: 184 LLIKALCKKGDVEGAIRILDEIPGMGMVPNVVSYTTVLGGYVARGDMAGSKR 339
           LL+KALCKK D+E A ++LDEIP MG+VPN+V+YTT+LGGYVARGDM  +KR
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247


>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317554|gb|EFH47976.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/112 (65%), Positives = 93/112 (83%)
 Frame = +1

Query: 4   EMALKMFLRIKKEFLVKASVRSFNTLLNALIQNKEFDLVYVLFKNCRKKFDIVPNVFTCN 183
           E ++++FLRI  +F VK SVRS NTLLN LIQN+ FDLV+ +FKN ++ F I PN+FTCN
Sbjct: 135 ESSMRIFLRIP-DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 193

Query: 184 LLIKALCKKGDVEGAIRILDEIPGMGMVPNVVSYTTVLGGYVARGDMAGSKR 339
           LL+KALCKK D+E A ++LDEIP MG+VPN+V+YTT+LGGYVARGDM  +KR
Sbjct: 194 LLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKR 245