BLASTX nr result

ID: Lithospermum22_contig00044272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044272
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]    92   3e-17
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CBI39664.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,...    80   1e-13

>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/107 (46%), Positives = 69/107 (64%)
 Frame = -3

Query: 321 MAIKLQSLKSSRKMXXXXXXXXXXXXXXVANIIQETPETYQIFKDSIFISDFESKIQFLK 142
           MA+KL SL  SR++               AN IQ  PE  Q  K     ++FE K QFL+
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQT-KTPPNDNEFEPKFQFLR 59

Query: 141 NKLHPERLNQVLDSTPDVNSSLELFKWASLQKKFKHNADTYYRIILK 1
           N+L P+ L +VLD+T D+NS++++FKWAS QK+F+H ADTY+R+ILK
Sbjct: 60  NRLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILK 106


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/107 (45%), Positives = 68/107 (63%)
 Frame = -3

Query: 321 MAIKLQSLKSSRKMXXXXXXXXXXXXXXVANIIQETPETYQIFKDSIFISDFESKIQFLK 142
           MA+KL SL  S ++               AN IQ  PE  Q  K     ++FE K QFL+
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQT-KTPPNDNEFEPKFQFLR 59

Query: 141 NKLHPERLNQVLDSTPDVNSSLELFKWASLQKKFKHNADTYYRIILK 1
           N+L P+ L +VLD+T D+NS++++FKWAS QK+F+H ADTY+R+ILK
Sbjct: 60  NRLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILK 106


>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 58/78 (74%)
 Frame = -3

Query: 234 ANIIQETPETYQIFKDSIFISDFESKIQFLKNKLHPERLNQVLDSTPDVNSSLELFKWAS 55
           AN IQ  PE  Q  K     ++FE K QFL+N+L P+ L +VLD+T D+NS++++FKWAS
Sbjct: 7   ANRIQAVPEIDQT-KTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTHDLNSAIKVFKWAS 65

Query: 54  LQKKFKHNADTYYRIILK 1
            QK+F+H ADTY+R+ILK
Sbjct: 66  RQKRFRHTADTYFRVILK 83


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = -3

Query: 231 NIIQETPETYQIFKDSIFISDFESKIQFLKNKLHPERLNQVLDSTPDVNSSLELFKWASL 52
           N IQ  PE  Q   ++    DF+ KIQ L+NKL+P+ L +VL ST DVNS++++FKWA+L
Sbjct: 28  NTIQINPEINQ---NTPNFPDFDVKIQSLRNKLYPDNLIKVLKSTSDVNSAVKIFKWAAL 84

Query: 51  QKKFKHNADTYYRIILK 1
           Q+KF H ADTYY II K
Sbjct: 85  QRKFNHTADTYYWIIFK 101


>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 739

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 56/75 (74%)
 Frame = -3

Query: 225 IQETPETYQIFKDSIFISDFESKIQFLKNKLHPERLNQVLDSTPDVNSSLELFKWASLQK 46
           IQ  PE  Q   ++   +DF++KI  L+NKL+P+ L +VL ST D+NS++++FKWASLQK
Sbjct: 44  IQINPEIDQSILNT---TDFDAKIHILRNKLYPDSLIKVLQSTSDINSAVKIFKWASLQK 100

Query: 45  KFKHNADTYYRIILK 1
           +F H +DTY+ IILK
Sbjct: 101 RFNHTSDTYFWIILK 115


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