BLASTX nr result

ID: Lithospermum22_contig00044259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044259
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]    78   9e-13
ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    77   1e-12
ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...    75   6e-12
ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis th...    75   7e-12
ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...    75   7e-12

>emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]
          Length = 427

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -1

Query: 232 LRHHFSLAKTTFWTLAFVGLIYISFFRSLHIAH--SDSSRRFLRT-SFYGPDWEKRVKES 62
           LR H SLAK TFW+  F+GLI+I FF S   +   SD SRR LRT S+ GP WEKRV+ S
Sbjct: 20  LRWHSSLAKLTFWSFVFLGLIFIFFFLSPSSSSLPSDPSRRSLRTYSWGGPAWEKRVRSS 79

Query: 61  SKIGSGNGNGVCVLVTGAAG 2
           +K+ +   NG+ VLVTGAAG
Sbjct: 80  AKVXA--RNGISVLVTGAAG 97


>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -1

Query: 232 LRHHFSLAKTTFWTLAFVGLIYISFFRSLHIAH--SDSSRRFLRT-SFYGPDWEKRVKES 62
           LR H SLAK TFW+  F+GLI+I FF S   +   SD SRR LRT S+ GP WEKRV+ S
Sbjct: 26  LRWHSSLAKLTFWSFVFLGLIFIFFFLSPSSSSLPSDPSRRSLRTYSWGGPAWEKRVRSS 85

Query: 61  SKIGSGNGNGVCVLVTGAAG 2
           +K+ +   NG+ VLVTGAAG
Sbjct: 86  AKVRA--RNGISVLVTGAAG 103


>ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297337875|gb|EFH68292.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -1

Query: 229 RHHFSLAKTTFWTLAFVGLIYISFFRSLHIAHSDSSRRFLRT-SFYGPDWEKRVKESSKI 53
           R   S+AK  FW+L F GL++I F+RS  I++ DSSRR LRT S+ GP WEKRV+ S+++
Sbjct: 28  RWQSSVAKLAFWSLVFFGLLFIFFYRS-PISNPDSSRRSLRTYSWGGPHWEKRVRSSARV 86

Query: 52  GSGNGNGVCVLVTGAAG 2
            +   NGV VLVTGAAG
Sbjct: 87  RT--RNGVSVLVTGAAG 101


>ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis thaliana]
           gi|75264107|sp|Q9LPC1.1|GAE2_ARATH RecName:
           Full=UDP-glucuronate 4-epimerase 2; AltName:
           Full=UDP-glucuronic acid epimerase 2
           gi|8570451|gb|AAF76478.1|AC020622_12 Contains similarity
           to CAPI protein from Staphylococcus aureus gi|P39858 and
           contains a NAD dependent epimerase/dehydratase PF|01370
           domain. ESTs gb|N97076, gb|AI997010 come from this gene
           [Arabidopsis thaliana]
           gi|12248041|gb|AAG50112.1|AF334734_1 putative nucleotide
           sugar epimerase [Arabidopsis thaliana]
           gi|332189243|gb|AEE27364.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis thaliana]
          Length = 434

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -1

Query: 229 RHHFSLAKTTFWTLAFVGLIYISFFRSLHIAHSDSSRRFLRT-SFYGPDWEKRVKESSKI 53
           R   S+AK  FW+L F GL++I F+RS  I++ DSSRR LRT S+ GP WEKRV+ S+++
Sbjct: 28  RWQSSVAKLAFWSLVFFGLLFIFFYRS-PISNPDSSRRSLRTYSWGGPAWEKRVRSSARV 86

Query: 52  GSGNGNGVCVLVTGAAG 2
            +   NGV VLVTGAAG
Sbjct: 87  RT--RNGVSVLVTGAAG 101


>ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -1

Query: 232 LRHHFSLAKTTFWTLAFVGLIYISFFRSLHIAH--SDSSRRFLRT-SFYGPDWEKRVKES 62
           LR H SLAK TFW+  F GLI+I FFRS   +   SDSS R  R+ S+ GP WEKRV+ S
Sbjct: 26  LRWHSSLAKLTFWSFVFSGLIFIFFFRSPSSSSLPSDSSIRSFRSYSWGGPAWEKRVRSS 85

Query: 61  SKIGSGNGNGVCVLVTGAAG 2
           +K+ +   NG+ VLVTGAAG
Sbjct: 86  AKVRA--RNGISVLVTGAAG 103


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