BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044242
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   228   5e-58
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...   226   2e-57
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   222   2e-56
ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arab...   221   4e-56
gb|AAF76467.1|AC020622_1 Contains similarity to excision repair ...   218   5e-55

>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  228 bits (580), Expect = 5e-58
 Identities = 116/159 (72%), Positives = 124/159 (77%)
 Frame = +3

Query: 3   AIKGLARKPHLRLIFFRTINLFSKFGAFPVFVVDGKPSPLKSQARIERFYRASGINLSSL 182
           A K   R PHLRL FFRTINLFSKFGAFPVFVVDG PSPLKSQARI RF+R SGI+LS L
Sbjct: 42  ATKANVRNPHLRLTFFRTINLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSGIDLSGL 101

Query: 183 PPVEEGVSVERNGIFKKYXXXXXXXXXXXGMPVLHAIREAEALCAQLNREGHVDACITAD 362
           P VEEGVSVERN  F +            G+PVL A  EAEALCAQLN EGHVDACITAD
Sbjct: 102 PVVEEGVSVERNAEFSRRVQECVELLELLGIPVLKAREEAEALCAQLNSEGHVDACITAD 161

Query: 363 SDAFLYGAKCVVKRLTPNSKDPFEIYHMSDIEAGLGLKR 479
           SDAFL+GAKCV+K L PN K+P E YHMSDIE+GLGLKR
Sbjct: 162 SDAFLFGAKCVIKCLRPNCKEPLECYHMSDIESGLGLKR 200


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score =  226 bits (575), Expect = 2e-57
 Identities = 116/159 (72%), Positives = 126/159 (79%)
 Frame = +3

Query: 3   AIKGLARKPHLRLIFFRTINLFSKFGAFPVFVVDGKPSPLKSQARIERFYRASGINLSSL 182
           AIK  ARKPHLRL FFRTINLFSKFGAFPVFVVDG PSPLKS+ARI RF+R+SGI+ S L
Sbjct: 42  AIKSYARKPHLRLTFFRTINLFSKFGAFPVFVVDGTPSPLKSRARISRFFRSSGIDSSVL 101

Query: 183 PPVEEGVSVERNGIFKKYXXXXXXXXXXXGMPVLHAIREAEALCAQLNREGHVDACITAD 362
           P  EEGVSVERNG F K            GMPVL A  EAEALCAQLN +G VDACITAD
Sbjct: 102 PTPEEGVSVERNGAFLKCVKECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITAD 161

Query: 363 SDAFLYGAKCVVKRLTPNSKDPFEIYHMSDIEAGLGLKR 479
           SDAFL+GAKCV+K + PNSK+PFE Y MSDIE+GL LKR
Sbjct: 162 SDAFLFGAKCVIKSIKPNSKEPFECYQMSDIESGLALKR 200


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  222 bits (566), Expect = 2e-56
 Identities = 112/159 (70%), Positives = 124/159 (77%)
 Frame = +3

Query: 3   AIKGLARKPHLRLIFFRTINLFSKFGAFPVFVVDGKPSPLKSQARIERFYRASGINLSSL 182
           AIK   +KPHLRL FFRTINLFSKFGAFPVFVVDG PSPLKSQARI RF+R+SGI  +SL
Sbjct: 42  AIKTHVKKPHLRLTFFRTINLFSKFGAFPVFVVDGTPSPLKSQARIARFFRSSGIESTSL 101

Query: 183 PPVEEGVSVERNGIFKKYXXXXXXXXXXXGMPVLHAIREAEALCAQLNREGHVDACITAD 362
           P  EEGVS  RN  F +            G+PVL A  EAEALCAQLN EGHVDACIT D
Sbjct: 102 PVAEEGVSAGRNSTFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPD 161

Query: 363 SDAFLYGAKCVVKRLTPNSKDPFEIYHMSDIEAGLGLKR 479
           SDAFL+GAKC++K  +PNSK+PFE Y+MSDIEAGLGLKR
Sbjct: 162 SDAFLFGAKCIIKSFSPNSKEPFECYNMSDIEAGLGLKR 200


>ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
           lyrata] gi|297335190|gb|EFH65607.1| hypothetical protein
           ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score =  221 bits (564), Expect = 4e-56
 Identities = 108/159 (67%), Positives = 128/159 (80%)
 Frame = +3

Query: 3   AIKGLARKPHLRLIFFRTINLFSKFGAFPVFVVDGKPSPLKSQARIERFYRASGINLSSL 182
           A+KG   KPHLRL FFRTINLFSKFGA+PVFVVDG PSPLKSQARI RF+R+SGI+  +L
Sbjct: 42  AVKGFVLKPHLRLTFFRTINLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNL 101

Query: 183 PPVEEGVSVERNGIFKKYXXXXXXXXXXXGMPVLHAIREAEALCAQLNREGHVDACITAD 362
           P +++GVSVERN +F ++            +PVL A  EAEALCAQLN EG+VDACIT D
Sbjct: 102 PVIKDGVSVERNKLFCEWVKECVELLELLSIPVLKANGEAEALCAQLNSEGYVDACITPD 161

Query: 363 SDAFLYGAKCVVKRLTPNSKDPFEIYHMSDIEAGLGLKR 479
           SDAFL+GAKCV+K + PNS++PFE YHMSDIE+GLGLKR
Sbjct: 162 SDAFLFGAKCVIKDIKPNSREPFECYHMSDIESGLGLKR 200


>gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
           sapiens gi|1082359 and contains XPG N-terminal PF|00752
           and XPG I-region PF|00867 domains [Arabidopsis thaliana]
          Length = 497

 Score =  218 bits (554), Expect = 5e-55
 Identities = 106/159 (66%), Positives = 126/159 (79%)
 Frame = +3

Query: 3   AIKGLARKPHLRLIFFRTINLFSKFGAFPVFVVDGKPSPLKSQARIERFYRASGINLSSL 182
           A+KG   KPHLRL FFRTINLFSKFGA+PVFVVDG PSPLKSQARI RF+R+SGI+  +L
Sbjct: 42  AVKGFVLKPHLRLTFFRTINLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNL 101

Query: 183 PPVEEGVSVERNGIFKKYXXXXXXXXXXXGMPVLHAIREAEALCAQLNREGHVDACITAD 362
           P +++GVSVERN +F ++           G+PVL A  EAEALCAQLN +G VDACIT D
Sbjct: 102 PVIKDGVSVERNKLFSEWVRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPD 161

Query: 363 SDAFLYGAKCVVKRLTPNSKDPFEIYHMSDIEAGLGLKR 479
           SDAFL+GA CV+K + PNS++PFE YHMS IE+GLGLKR
Sbjct: 162 SDAFLFGAMCVIKDIKPNSREPFECYHMSHIESGLGLKR 200