BLASTX nr result

ID: Lithospermum22_contig00044184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044184
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...    86   2e-15
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]    86   4e-15
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
emb|CBI30729.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
           chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = -3

Query: 238 WNNVIKAYALSKNNAREAILAFQSMRRCEAVPNEYTFPFLFKACSSFSGLNEGRQIHAHV 59
           WN++I++YA ++++ REAI A+  MR     P++ TFP L KAC++ S  NEGR+I   V
Sbjct: 728 WNDLIRSYA-TRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKIQVDV 786

Query: 58  FKHGLCSNLYVQNTMIYFY 2
            KHGL  N+YVQNTMI+FY
Sbjct: 787 MKHGLDCNVYVQNTMIHFY 805


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/79 (51%), Positives = 56/79 (70%)
 Frame = -3

Query: 238 WNNVIKAYALSKNNAREAILAFQSMRRCEAVPNEYTFPFLFKACSSFSGLNEGRQIHAHV 59
           WN++I++YA ++++ REAI A+  MR     P++ TFP L KAC+  S  NEGR+I   V
Sbjct: 87  WNDLIRSYA-TRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKIQVDV 145

Query: 58  FKHGLCSNLYVQNTMIYFY 2
            KHGL  N+YVQNTMI+FY
Sbjct: 146 MKHGLDCNVYVQNTMIHFY 164


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -3

Query: 238 WNNVIKAYALSKNNAREAILAFQSMRRCEAVPNEYTFPFLFKACSSFSGLNEGRQIHAHV 59
           WN +I+AYA S      A+  F  M     +P++YTF F  K+C SFSG+ EGRQIH HV
Sbjct: 76  WNTIIRAYANSPT-PEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHV 134

Query: 58  FKHGLCSNLYVQNTMIYFY 2
            K GL  +L++QNT+I+ Y
Sbjct: 135 LKTGLGDDLFIQNTLIHLY 153


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = -3

Query: 238 WNNVIKAYALSKNNAREAILAFQSMRRCEAVPNEYTFPFLFKACSSFSGLNEGRQIHAHV 59
           WN +I+AYA S      A+  F  M     +P++YTF F  K+C SFSG+ EGRQIH HV
Sbjct: 76  WNTIIRAYANSPT-PEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHV 134

Query: 58  FKHGLCSNLYVQNTMIYFY 2
            K GL  +L++QNT+I+ Y
Sbjct: 135 LKTGLGDDLFIQNTLIHLY 153


>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = -3

Query: 313 SDNLETHHTLNLFNVTWS*N*MPPYWNNVIKAYALSKNNAREAILAFQSMRRCEAVPNEY 134
           S++ +  + L LFN T   N     WN +I+A+A S N + EA+L +  MRR + +P ++
Sbjct: 71  SESGDLSYALRLFNNTQEPNSF--MWNTLIRAHASSLNPS-EALLLYVDMRRLDVIPGKH 127

Query: 133 TFPFLFKACSSFSGLNEGRQIHAHVFKHGLCSNLYVQNTMIYFY 2
           TFPFL KACS+F  L    Q+H HV K GL  NL+V N ++  Y
Sbjct: 128 TFPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAY 171


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