BLASTX nr result

ID: Lithospermum22_contig00044178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044178
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    86   3e-15
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    86   3e-15
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    81   8e-14
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    80   1e-13

>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/88 (54%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
 Frame = -2

Query: 247 VMNENASLQVPIKPTAKKQSIKKHNLPLSPLHRTAISECDFDSRRDFNGFDASRVVEQS- 71
           V++EN+SLQVP++   KKQS KK  LPL+P HR A+SECD +SRR+F+GF++ + VE + 
Sbjct: 303 VLDENSSLQVPVRTPMKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNG 362

Query: 70  -----SSDINGIQKIKRECFSVSKTWLR 2
                SS  NGI + KRE FS+SK WLR
Sbjct: 363 TASIVSSSGNGIGRSKRESFSISKIWLR 390


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 11/93 (11%)
 Frame = -2

Query: 247 VMNENASLQVPIKPTAKKQSIKKHNLPLSPLHRTAISECDFDSRRDFNGFDA-------- 92
           VM+EN+SLQVPI+   KK S K+ +LPL+P  R A+SECD +SRR+F+GFDA        
Sbjct: 344 VMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRREFSGFDAVKGGDTHM 403

Query: 91  ---SRVVEQSSSDINGIQKIKRECFSVSKTWLR 2
              S ++  ++ + N I + KRE FS+SK WLR
Sbjct: 404 GSSSSIITGNNGNGNAIGRSKRESFSISKIWLR 436


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 11/93 (11%)
 Frame = -2

Query: 247 VMNENASLQVPIKPTAKKQSIKKHNLPLSPLHRTAISECDFDSRRDFNGFDA-------- 92
           VM+EN+SLQVPI+   KK S K+ +LPL+P  R A+SECD +SRR+F+GFDA        
Sbjct: 344 VMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRREFSGFDAVKGGDTHM 403

Query: 91  ---SRVVEQSSSDINGIQKIKRECFSVSKTWLR 2
              S ++  ++ + N I + KRE FS+SK WLR
Sbjct: 404 GSSSSIITGNNGNGNAIGRSKRESFSISKIWLR 436


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 9/91 (9%)
 Frame = -2

Query: 247 VMNENASLQVPIKPTAKKQSIKKHNLPLSPLHRTAISECDFDSRRDFNG-FDASRVVEQ- 74
           VM++N SLQV I+   KKQS KK ++PL+P HR A+SECD +SRR+FNG F+  R +E  
Sbjct: 303 VMDDNTSLQVAIRTPMKKQSSKKPSIPLTPGHRPAMSECDCESRREFNGLFEGIRSMEAN 362

Query: 73  -------SSSDINGIQKIKRECFSVSKTWLR 2
                  + S  N I + KRE FS+SK WLR
Sbjct: 363 GNVSGVVTKSIGNSIGRSKRESFSISKIWLR 393


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 17/99 (17%)
 Frame = -2

Query: 247 VMNENASLQVPIKPTAKKQSIKKHN-LPLSPLHRTAISECDFDSRRDFN--GFDASRVVE 77
           VM+E++SLQVPI+   KKQS KK + LPL+P HR A+SECD +SRRDF   GFDA+ +VE
Sbjct: 312 VMDESSSLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAGFDATTIVE 371

Query: 76  Q---------SSSDING-----IQKIKRECFSVSKTWLR 2
                     +S+  NG     I + ++E FS+SK WLR
Sbjct: 372 DDAASTGATTASTTCNGNSAAAIGRSRKESFSISKIWLR 410


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