BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044092
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187516.1| pentatricopeptide repeat-containing protein [Ar...    74   1e-11
ref|XP_002884708.1| pentatricopeptide repeat-containing protein ...    72   5e-11
ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucu...    60   1e-07

>ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
           gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein
           [Arabidopsis thaliana] gi|332641192|gb|AEE74713.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1028

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = +1

Query: 115 QCKKIQSRRLFDEMPQRVLFSLKLNKKIHSLSMKLGFSSEGKLGDAIVDLYGKCGDL 285
           QCK  +SR++FDEMPQR+  +L++ K +HS S+ LG  SEG+LG+AIVDLY KC  +
Sbjct: 55  QCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQV 111


>ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330548|gb|EFH60967.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1028

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/57 (54%), Positives = 43/57 (75%)
 Frame = +1

Query: 115 QCKKIQSRRLFDEMPQRVLFSLKLNKKIHSLSMKLGFSSEGKLGDAIVDLYGKCGDL 285
           QCK  +SR++FDEMP R+  +L++ K +HS S+ LG  SEG+LG+AIVDLY KC  +
Sbjct: 55  QCKLFKSRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQV 111


>ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
           gi|302142763|emb|CBI19966.3| unnamed protein product
           [Vitis vinifera]
          Length = 1048

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 16  NYHH--NFSTFPQQIFHKPXXXXXXXXXXXXXXXNQCKKIQSRRLFDEMPQRVLFSLKLN 189
           ++HH  NFST  +Q+                    QC++I+ R  FDE PQR+  + + +
Sbjct: 43  SFHHQSNFSTIQRQV--NQTSEHKIFTHLLKICLQQCQRIKIRHPFDETPQRLAQASRTS 100

Query: 190 KKIHSLSMKLGFSSEGKLGDAIVDLYGKCGDL 285
           K IH+ ++K GF S+G+LG AIVDLY KCG++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNV 132


>ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|222856928|gb|EEE94475.1|
           predicted protein [Populus trichocarpa]
          Length = 1026

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = +1

Query: 121 KKIQSRRLFDEMPQRVLFSLKLNKKIHSLSMKLGFSSEGKLGDAIVDLYGKCGDL 285
           K++++  LFDE+PQR+      NK IH+ S+KLGF S+G LG+ IVDLY KC D+
Sbjct: 56  KQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADV 110


>gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = +1

Query: 118 CKKIQSRRLFDEMPQRVLFSLKLNKKIHSLSMKLGFSSEGKLGDAIVDLYGKCGDL 285
           C++IQ+  LF+E P+ VL +L   K IHS S+K+G   +G LG+ IVDLY KCG++
Sbjct: 37  CRRIQAHNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNV 92