BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044088
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia ac...   234   7e-60
gb|ADO13870.1| RNA polymerase beta subunit [Gonocaryum litorale]      222   2e-56
gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata]             221   4e-56
gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta]   221   4e-56
gb|ABD93759.1| RNA polymerase beta chain [Ilex sp. Qiu 94038]         221   4e-56

>gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia acuminata]
          Length = 1381

 Score =  234 bits (596), Expect = 7e-60
 Identities = 116/122 (95%), Positives = 119/122 (97%)
 Frame = -2

Query: 368  DKISRHSGVLIPPGEGKKNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 189
            DKISRHSGVLIPPG GK NSKES+KLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL
Sbjct: 734  DKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 793

Query: 188  STLFPPELLQERDDVQLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIE 9
            STLFPP+LLQERD+VQLRVVNYILYGNGKPIRGI DTSIQLVRTCLVLSWDQETKSSSIE
Sbjct: 794  STLFPPDLLQERDNVQLRVVNYILYGNGKPIRGISDTSIQLVRTCLVLSWDQETKSSSIE 853

Query: 8    EA 3
            EA
Sbjct: 854  EA 855


>gb|ADO13870.1| RNA polymerase beta subunit [Gonocaryum litorale]
          Length = 1123

 Score =  222 bits (566), Expect = 2e-56
 Identities = 107/122 (87%), Positives = 117/122 (95%)
 Frame = -2

Query: 368  DKISRHSGVLIPPGEGKKNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 189
            DKISRHSGVLIPPG GK NSKES+KLKNWIYVQRITP KKKYFVLVRPVVTYEITDGINL
Sbjct: 712  DKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKYFVLVRPVVTYEITDGINL 771

Query: 188  STLFPPELLQERDDVQLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIE 9
            +TLFPP+LL+ERD+VQLRV+NYILYGNGKPIRG+ DTSIQ+VRTCLVL+WDQ+ KSSSIE
Sbjct: 772  ATLFPPDLLRERDNVQLRVINYILYGNGKPIRGVSDTSIQVVRTCLVLNWDQDKKSSSIE 831

Query: 8    EA 3
            EA
Sbjct: 832  EA 833


>gb|ADO13878.1| RNA polymerase beta subunit [Ilex crenata]
          Length = 1182

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/122 (89%), Positives = 116/122 (95%)
 Frame = -2

Query: 368  DKISRHSGVLIPPGEGKKNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 189
            DKISRHSGVLIPPG GK NSKES+KLKNWIYVQRITP KKKYFVLVRPVVTYEITDGINL
Sbjct: 720  DKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKYFVLVRPVVTYEITDGINL 779

Query: 188  STLFPPELLQERDDVQLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIE 9
            +TLFP +LLQERD+VQLRV+NYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIE
Sbjct: 780  ATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIE 839

Query: 8    EA 3
            EA
Sbjct: 840  EA 841


>gb|ADD31153.1| RNA polymerase beta'' subunit protein [Ilex cornuta]
          Length = 1384

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/122 (89%), Positives = 116/122 (95%)
 Frame = -2

Query: 368  DKISRHSGVLIPPGEGKKNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 189
            DKISRHSGVLIPPG GK NSKES+KLKNWIYVQRITP KKKYFVLVRPVVTYEITDGINL
Sbjct: 734  DKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKYFVLVRPVVTYEITDGINL 793

Query: 188  STLFPPELLQERDDVQLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIE 9
            +TLFP +LLQERD+VQLRV+NYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIE
Sbjct: 794  ATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIE 853

Query: 8    EA 3
            EA
Sbjct: 854  EA 855


>gb|ABD93759.1| RNA polymerase beta chain [Ilex sp. Qiu 94038]
          Length = 866

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/122 (89%), Positives = 116/122 (95%)
 Frame = -2

Query: 368 DKISRHSGVLIPPGEGKKNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL 189
           DKISRHSGVLIPPG GK NSKES+KLKNWIYVQRITP KKKYFVLVRPVVTYEITDGINL
Sbjct: 285 DKISRHSGVLIPPGTGKTNSKESKKLKNWIYVQRITPIKKKYFVLVRPVVTYEITDGINL 344

Query: 188 STLFPPELLQERDDVQLRVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIE 9
           +TLFP +LLQERD+VQLRV+NYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIE
Sbjct: 345 ATLFPLDLLQERDNVQLRVINYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIE 404

Query: 8   EA 3
           EA
Sbjct: 405 EA 406