BLASTX nr result

ID: Lithospermum22_contig00044064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00044064
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    56   3e-06
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    55   8e-06
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...    55   8e-06

>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = -2

Query: 167 SPSLWHLRLGHPWPDVLQRLVSNKKIDYNSFSRNILCNICELGNQSKLPFSVSN 6
           S  +WH RLGHP P VLQ+LV    I  N  S++ LC  C+LG  ++LPF  S+
Sbjct: 463 SDEVWHRRLGHPHPQVLQQLVKTNSISINKTSKS-LCEACQLGKSTRLPFVSSS 515


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -2

Query: 176 VHKSPSLWHLRLGHPWPDVLQRLVSNKKIDYNSFSRNILCNICELGNQSKLPFSVS 9
           V  S  +WH RLGHP P +LQRL S K +  N  S++ LC  C++   S+LPFS S
Sbjct: 458 VAASDEVWHQRLGHPNPHILQRLASIKSVFINKRSKS-LCVSCQMAKSSRLPFSAS 512


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = -2

Query: 167 SPSLWHLRLGHPWPDVLQRLVSNKKIDYNSFSRNILCNICELGNQSKLPFSVSN 6
           S  +WH+RLGHP  DVLQ+L+ NK I  +  S + LC+ C++G   KLPF+ S+
Sbjct: 423 SDEVWHMRLGHPNQDVLQQLLRNKAIVISKTSHS-LCDACQMGKICKLPFASSD 475


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