BLASTX nr result

ID: Lithospermum22_contig00043973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043973
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519145.1| DNA binding protein, putative [Ricinus commu...    84   1e-14
ref|NP_188529.2| B3 domain-containing transcription factor VRN1 ...    82   6e-14
ref|XP_002885287.1| hypothetical protein ARALYDRAFT_479415 [Arab...    82   6e-14
ref|XP_003529203.1| PREDICTED: B3 domain-containing transcriptio...    81   1e-13
gb|ACU18995.1| unknown [Glycine max]                                   81   1e-13

>ref|XP_002519145.1| DNA binding protein, putative [Ricinus communis]
           gi|223541808|gb|EEF43356.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 333

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/100 (43%), Positives = 65/100 (65%)
 Frame = +1

Query: 121 FFQIILSSTLQEGKLKIPDKFVYEYGNEFSDSVTLSVPTY*KIPGRCWDVAVVRETDDRI 300
           F ++ILS+++++ KL+IPD FV ++GN+ S    LSVP      G  W V +++  DD+ 
Sbjct: 6   FHKLILSNSIKDKKLRIPDNFVKKFGNDLSAFGRLSVPG-----GPVWPVGLIK-ADDKF 59

Query: 301 WLHDGMFKFMEDNSIEVDYFLSFKLKGNSKFVVHIYDLKA 420
           W  +G  +FME  SI V YFL F+ +G+S F VHI++L A
Sbjct: 60  WFREGWQEFMERYSIRVGYFLVFRYEGHSVFTVHIFNLSA 99


>ref|NP_188529.2| B3 domain-containing transcription factor VRN1 [Arabidopsis
           thaliana] gi|75153628|sp|Q8L3W1.1|VRN1_ARATH RecName:
           Full=B3 domain-containing transcription factor VRN1;
           AltName: Full=Protein VERNALIZATION 1
           gi|21734794|gb|AAM76972.1|AF289051_1 reduced
           vernalization response 1 [Arabidopsis thaliana]
           gi|21734796|gb|AAM76973.1|AF289052_1 reduced
           vernalization response 1 [Arabidopsis thaliana]
           gi|89000959|gb|ABD59069.1| At3g18990 [Arabidopsis
           thaliana] gi|110741272|dbj|BAF02186.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|225898655|dbj|BAH30458.1| hypothetical protein
           [Arabidopsis thaliana] gi|332642657|gb|AEE76178.1| B3
           domain-containing transcription factor VRN1 [Arabidopsis
           thaliana]
          Length = 341

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = +1

Query: 121 FFQIILSSTLQEGKLKIPDKFVYEYGNEFSDSVTLSVPTY*KIPGRCWDVAVVRETDDRI 300
           F ++I SST+QE +L++PDKFV ++ +E S +V L+VP      G  W V + R+ D++I
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPD-----GHVWRVGL-RKADNKI 59

Query: 301 WLHDGMFKFMEDNSIEVDYFLSFKLKGNSKFVVHIYDL 414
           W  DG  +F++  SI + Y L F+ +GNS F V+I++L
Sbjct: 60  WFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNL 97


>ref|XP_002885287.1| hypothetical protein ARALYDRAFT_479415 [Arabidopsis lyrata subsp.
           lyrata] gi|297331127|gb|EFH61546.1| hypothetical protein
           ARALYDRAFT_479415 [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = +1

Query: 121 FFQIILSSTLQEGKLKIPDKFVYEYGNEFSDSVTLSVPTY*KIPGRCWDVAVVRETDDRI 300
           F ++I SST+QE +L++PDKFV ++ +E S +V L+VP      G  W V + R+ D++I
Sbjct: 6   FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPD-----GHVWRVGL-RKADNKI 59

Query: 301 WLHDGMFKFMEDNSIEVDYFLSFKLKGNSKFVVHIYDL 414
           W  DG  +F++  SI + Y L F+ +GNS F V+I++L
Sbjct: 60  WFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNL 97


>ref|XP_003529203.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 437

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/98 (41%), Positives = 62/98 (63%)
 Frame = +1

Query: 121 FFQIILSSTLQEGKLKIPDKFVYEYGNEFSDSVTLSVPTY*KIPGRCWDVAVVRETDDRI 300
           F +++L +TLQ  +L+IPD F+ +YG + S   TL+VP      G  W + + ++ D+RI
Sbjct: 6   FDKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPD-----GSVWPIGL-KKADNRI 59

Query: 301 WLHDGMFKFMEDNSIEVDYFLSFKLKGNSKFVVHIYDL 414
           W  DG   F++  SI V YFL F  +GNS F+VHI++L
Sbjct: 60  WFVDGWQDFVQRYSIGVGYFLVFMYEGNSSFIVHIFNL 97


>gb|ACU18995.1| unknown [Glycine max]
          Length = 437

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/98 (41%), Positives = 62/98 (63%)
 Frame = +1

Query: 121 FFQIILSSTLQEGKLKIPDKFVYEYGNEFSDSVTLSVPTY*KIPGRCWDVAVVRETDDRI 300
           F +++L +TLQ  +L+IPD F+ +YG + S   TL+VP      G  W + + ++ D+RI
Sbjct: 6   FDKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPD-----GSVWPIGL-KKADNRI 59

Query: 301 WLHDGMFKFMEDNSIEVDYFLSFKLKGNSKFVVHIYDL 414
           W  DG   F++  SI V YFL F  +GNS F+VHI++L
Sbjct: 60  WFVDGWQDFVQRYSIGVGYFLVFMYEGNSSFIVHIFNL 97


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