BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043959
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containi...   259   2e-67
emb|CBI26526.3| unnamed protein product [Vitis vinifera]              251   9e-65
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...   251   9e-65
ref|NP_198079.1| pentatricopeptide repeat-containing protein [Ar...   244   1e-62
ref|XP_002874390.1| pentatricopeptide repeat-containing protein ...   243   2e-62

>ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Cucumis sativus]
          Length = 1062

 Score =  259 bits (663), Expect = 2e-67
 Identities = 131/174 (75%), Positives = 141/174 (81%)
 Frame = +2

Query: 95  VICSSISPDPWSLSDGXXXXXXXXXXXXXXXXXXXXDDNARRIIKAKAQYLSVLRRNQGS 274
           +I  S++PDPWSLSDG                    DDNARRIIKAKAQYLSVLRRNQG 
Sbjct: 35  IIRLSVTPDPWSLSDGNPARPKPRSKNAKKPLS---DDNARRIIKAKAQYLSVLRRNQGP 91

Query: 275 QAQTPRWIKRSPEQMVQYLEDDRNGHLYGKHVVAAIKKVRSLSGKAEGAYDMRQVMGSFV 454
           +AQTP+WIKR+PEQMVQYLEDDRNGHLYGKHVVAAI+ VRSLS K EG Y+MR  M SFV
Sbjct: 92  RAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVAAIRHVRSLSQKTEGEYNMRMEMASFV 151

Query: 455 AKLTFREMCTVLKEQKGWRQVRDFFDWMKLQLSYRPSVIVYTIVIRAYGQVGKV 616
            KLTFREMC VLKEQKGWRQVRD FDWMKLQLSYRPSVIVYTIV+RAYGQVGK+
Sbjct: 152 EKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRAYGQVGKI 205


>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score =  251 bits (640), Expect = 9e-65
 Identities = 122/175 (69%), Positives = 142/175 (81%)
 Frame = +2

Query: 92  IVICSSISPDPWSLSDGXXXXXXXXXXXXXXXXXXXXDDNARRIIKAKAQYLSVLRRNQG 271
           ++I  S+ PDPWSLS G                    DDNARRIIK KA+YLSVLRRNQG
Sbjct: 39  LIIHCSVHPDPWSLSTGNRPKPISKNPKNPLS-----DDNARRIIKGKARYLSVLRRNQG 93

Query: 272 SQAQTPRWIKRSPEQMVQYLEDDRNGHLYGKHVVAAIKKVRSLSGKAEGAYDMRQVMGSF 451
            QAQTP+WIKR+PEQMVQYL+DDRNGHLYGKHVVAAI+ VRSL+ + +G+Y+MR+VMGSF
Sbjct: 94  PQAQTPKWIKRTPEQMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSF 153

Query: 452 VAKLTFREMCTVLKEQKGWRQVRDFFDWMKLQLSYRPSVIVYTIVIRAYGQVGKV 616
           VAKL+FREMC VLKEQ+GWRQ RDFF WMKLQLSY+PSVIVYTI++R YGQVGK+
Sbjct: 154 VAKLSFREMCVVLKEQRGWRQARDFFGWMKLQLSYQPSVIVYTILLRVYGQVGKI 208


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score =  251 bits (640), Expect = 9e-65
 Identities = 122/175 (69%), Positives = 142/175 (81%)
 Frame = +2

Query: 92  IVICSSISPDPWSLSDGXXXXXXXXXXXXXXXXXXXXDDNARRIIKAKAQYLSVLRRNQG 271
           ++I  S+ PDPWSLS G                    DDNARRIIK KA+YLSVLRRNQG
Sbjct: 39  LIIHCSVHPDPWSLSTGNRPKPISKNPKNPLS-----DDNARRIIKGKARYLSVLRRNQG 93

Query: 272 SQAQTPRWIKRSPEQMVQYLEDDRNGHLYGKHVVAAIKKVRSLSGKAEGAYDMRQVMGSF 451
            QAQTP+WIKR+PEQMVQYL+DDRNGHLYGKHVVAAI+ VRSL+ + +G+Y+MR+VMGSF
Sbjct: 94  PQAQTPKWIKRTPEQMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSF 153

Query: 452 VAKLTFREMCTVLKEQKGWRQVRDFFDWMKLQLSYRPSVIVYTIVIRAYGQVGKV 616
           VAKL+FREMC VLKEQ+GWRQ RDFF WMKLQLSY+PSVIVYTI++R YGQVGK+
Sbjct: 154 VAKLSFREMCVVLKEQRGWRQARDFFGWMKLQLSYQPSVIVYTILLRVYGQVGKI 208


>ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635757|sp|O04647.2|PP399_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
           gi|332006282|gb|AED93665.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1038

 Score =  244 bits (622), Expect = 1e-62
 Identities = 121/171 (70%), Positives = 135/171 (78%)
 Frame = +2

Query: 104 SSISPDPWSLSDGXXXXXXXXXXXXXXXXXXXXDDNARRIIKAKAQYLSVLRRNQGSQAQ 283
           S + PDPWSLSDG                    DD+ARRIIK KAQYLS LRRNQGSQA 
Sbjct: 37  SKVRPDPWSLSDGNPEKPKPRYERPKHPLS---DDDARRIIKKKAQYLSTLRRNQGSQAM 93

Query: 284 TPRWIKRSPEQMVQYLEDDRNGHLYGKHVVAAIKKVRSLSGKAEGAYDMRQVMGSFVAKL 463
           TP+WIKR+PEQMVQYLEDDRNG +YGKHVVAAIK VR LS + +G+ DMR VM SFVAKL
Sbjct: 94  TPKWIKRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFVAKL 153

Query: 464 TFREMCTVLKEQKGWRQVRDFFDWMKLQLSYRPSVIVYTIVIRAYGQVGKV 616
           +FR+MC VLKEQ+GWRQVRDFF WMKLQLSYRPSV+VYTIV+R YGQVGK+
Sbjct: 154 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKI 204


>ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320227|gb|EFH50649.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1027

 Score =  243 bits (621), Expect = 2e-62
 Identities = 121/171 (70%), Positives = 134/171 (78%)
 Frame = +2

Query: 104 SSISPDPWSLSDGXXXXXXXXXXXXXXXXXXXXDDNARRIIKAKAQYLSVLRRNQGSQAQ 283
           S + PDPWSLSDG                    DD+ARRIIK KAQYLS LRRNQGS A 
Sbjct: 36  SKVRPDPWSLSDGNPEKPKPRYERPKHPLS---DDDARRIIKKKAQYLSTLRRNQGSHAM 92

Query: 284 TPRWIKRSPEQMVQYLEDDRNGHLYGKHVVAAIKKVRSLSGKAEGAYDMRQVMGSFVAKL 463
           TP+WIKR+PEQMVQYLEDDRNG +YGKHVVAAIK VR LS + EG+ DMR VM SFVAKL
Sbjct: 93  TPKWIKRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRREGSDDMRLVMSSFVAKL 152

Query: 464 TFREMCTVLKEQKGWRQVRDFFDWMKLQLSYRPSVIVYTIVIRAYGQVGKV 616
           +FR+MC VLKEQ+GWRQVRDFF WMKLQLSYRPSV+VYTIV+R YGQVGK+
Sbjct: 153 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKI 203