BLASTX nr result

ID: Lithospermum22_contig00043953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043953
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003590548.1| F-box/kelch-repeat protein [Medicago truncat...    57   1e-06

>ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|222838116|gb|EEE76481.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
 Frame = -3

Query: 337 KSLLRHQCVSRQWGSLISDPCFVRLHTQKVTSVASSAIFLVGECTKSPIYLSKMENEYQI 158
           K LL+ +CVS+QW SLISDP F   HT      A SA+FL+     SP  +  ++NE   
Sbjct: 106 KPLLKFKCVSKQWLSLISDPKFCASHTHHQPPTAPSALFLLSYLASSPQLIVPLKNE--- 162

Query: 157 VETNPLDMEEKLLNRAK-SGLFIRHSCNGLICIACPVDKLYSIE-SFWCQVYNP 2
               P+      L+     G  I  SCNGL  + C    + S +  +W  + NP
Sbjct: 163 ----PMPNTMPFLDHLNIPGFCIDQSCNGL--LLCSFTCIDSTDLGYWFFICNP 210


>ref|XP_003590548.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355479596|gb|AES60799.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 388

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
 Frame = -3

Query: 337 KSLLRHQCVSRQWGSLISDPCFVRLHTQKVTSVASSAIFLV----GECTKSPIYLSKMEN 170
           K+L++ +CVS+ W +LISD  FV++H  +  S   S  +LV    G+    P  +  + N
Sbjct: 30  KTLMKMKCVSKSWNTLISDSNFVKMHLNR--SARHSQSYLVSEHRGDYNFVPFSVRGLMN 87

Query: 169 EYQIVETNPLDMEEKLLNRAKSGLFIRHSCNGLICIACPVDKLYSIESFWCQVYNP 2
              I  T P D   +L+ +   G  +  SCNGL+C++  V  +   E  W +++NP
Sbjct: 88  GRSI--TLPKDPYYQLIEKDCPG--VVGSCNGLVCLSGCVADVEEFEEMWLRIWNP 139


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