BLASTX nr result

ID: Lithospermum22_contig00043945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043945
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]    78   7e-13
emb|CBI28040.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric...    70   2e-10
ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...    58   9e-07
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   9e-07

>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = -2

Query: 286 KKLLDENCRNFAGYFKEVLRDKETVGLLNPPKVVLQNHEIYDEFECERDE-NEKEDFQLQ 110
           +++LDENCR   GYF+EVL ++    L+ PP ++ +     DEF+   DE N+ E+  L 
Sbjct: 503 EEVLDENCRLLVGYFREVLGNENGSRLIRPPSLIFEKXRKSDEFKFNEDEQNKVEEIGLG 562

Query: 109 NGRF-NPMWVDEERSMEENNSKNKTVKKYPSFVPERV 2
           NGR+ NP W + ERS+E  +S + +  K P F P+RV
Sbjct: 563 NGRYNNPTWTEGERSVEFYSSGSSSKSKSPPFYPQRV 599


>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = -2

Query: 286 KKLLDENCRNFAGYFKEVLRDKETVGLLNPPKVVLQNHEIYDEFECERDE-NEKEDFQLQ 110
           +++LDENCR   GYF+EVL ++    L+ PP ++ +     DEF+   DE N+ E+  L 
Sbjct: 17  EEVLDENCRLLVGYFREVLGNENGSRLIRPPSLIFEKTRKSDEFKFNEDEQNKVEEIGLG 76

Query: 109 NGRF-NPMWVDEERSMEENNSKNKTVKKYPSFVPERV 2
           NGR+ NP W + ERS+E  +S + +  K P F P+RV
Sbjct: 77  NGRYNNPTWTEGERSVEFYSSGSSSKSKSPPFYPQRV 113


>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223546727|gb|EEF48225.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1268

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 LLDENCRNFAGYFKEVLRDKETVGLLNPPKVVLQNHEIYDEFECERDENEK-EDFQLQNG 104
           +LDENCR +A YFKE+L++ +   ++ PP ++L+     D+     D+  K E+  L+NG
Sbjct: 206 VLDENCRVYAQYFKEILKNNDENRVITPPSLILKETGKVDKLNGSEDKMIKTEELGLKNG 265

Query: 103 RFNPMWVDEERSMEENNSKNKTVKKY-PSFVPERV 2
           R+NP+W D ERS+E  +    +  K+ PS  P RV
Sbjct: 266 RYNPIWADGERSVEFFSFGGSSRSKFPPSSNPRRV 300


>ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein
           ligase LIN-2-like [Cucumis sativus]
          Length = 1230

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = -2

Query: 286 KKLLDENCRNFAGYFKEVLRDKETVGLLNPPKVVLQN-HEIYDEFE-CERDENEKEDFQL 113
           +++LD NC +FA +FK++L  KE    +  PKV L N  E + E E    D+   E   L
Sbjct: 202 ERVLDRNCIDFAEHFKKILERKEESEWIASPKVKLLNKKEKWKEMEQILEDKLRTEHLSL 261

Query: 112 QNGRFNPMWVDEER--SMEENNSKNKTVKKYPSFVP 11
            NGR+NP+WV+E+   S+ E +S  K+    PS  P
Sbjct: 262 PNGRYNPVWVEEDPIVSLVEVDSATKSKSPSPSPSP 297


>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 1336

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = -2

Query: 286 KKLLDENCRNFAGYFKEVLRDKETVGLLNPPKVVLQN-HEIYDEFE-CERDENEKEDFQL 113
           +++LD NC +FA +FK++L  KE    +  PKV L N  E + E E    D+   E   L
Sbjct: 202 ERVLDRNCIDFAEHFKKILERKEESEWIASPKVKLLNKKEKWKEMEQILEDKLRTEHLSL 261

Query: 112 QNGRFNPMWVDEER--SMEENNSKNKTVKKYPSFVP 11
            NGR+NP+WV+E+   S+ E +S  K+    PS  P
Sbjct: 262 PNGRYNPVWVEEDPIVSLVEVDSATKSKSPSPSPSP 297


Top