BLASTX nr result

ID: Lithospermum22_contig00043943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043943
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003563549.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    77   1e-12
ref|NP_001058552.2| Os06g0711700 [Oryza sativa Japonica Group] g...    77   1e-12
dbj|BAJ89868.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   1e-12

>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +2

Query: 242 LLPGLPDHIAQLCLSLVPPYTLSSVCNSWRQLIYSPTFPPFLSIY 376
           L+PGLPDH+AQLCLSLVPP  L SVC+SWR+LIYSP FPPFLS+Y
Sbjct: 30  LIPGLPDHVAQLCLSLVPPSLLYSVCHSWRRLIYSPAFPPFLSLY 74


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/47 (74%), Positives = 41/47 (87%)
 Frame = +2

Query: 236 QSLLPGLPDHIAQLCLSLVPPYTLSSVCNSWRQLIYSPTFPPFLSIY 376
           Q L+PGLP+ IAQLCLSLV P TL SVC+SWR+LIYSP+FPPF S+Y
Sbjct: 33  QPLIPGLPNDIAQLCLSLVHPSTLYSVCHSWRRLIYSPSFPPFFSLY 79


>ref|XP_003563549.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Brachypodium
           distachyon]
          Length = 420

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/47 (68%), Positives = 40/47 (85%)
 Frame = +2

Query: 236 QSLLPGLPDHIAQLCLSLVPPYTLSSVCNSWRQLIYSPTFPPFLSIY 376
           Q LLPGLPDH+AQLCLS +PP  L +VC  WR+L+Y+P+FPPFLS+Y
Sbjct: 56  QPLLPGLPDHLAQLCLSPLPPRLLHAVCRPWRRLLYAPSFPPFLSLY 102


>ref|NP_001058552.2| Os06g0711700 [Oryza sativa Japonica Group]
           gi|53792639|dbj|BAD53653.1| F-box family protein-like
           [Oryza sativa Japonica Group]
           gi|53792877|dbj|BAD54054.1| F-box family protein-like
           [Oryza sativa Japonica Group]
           gi|255677391|dbj|BAF20466.2| Os06g0711700 [Oryza sativa
           Japonica Group]
          Length = 437

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/47 (68%), Positives = 40/47 (85%)
 Frame = +2

Query: 236 QSLLPGLPDHIAQLCLSLVPPYTLSSVCNSWRQLIYSPTFPPFLSIY 376
           Q LLPGLPDH+AQLCLS +PP  L +VC  WR+L+Y+P+FPPFLS+Y
Sbjct: 67  QPLLPGLPDHLAQLCLSPLPPRLLHAVCRPWRRLMYAPSFPPFLSLY 113


>dbj|BAJ89868.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 413

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = +2

Query: 236 QSLLPGLPDHIAQLCLSLVPPYTLSSVCNSWRQLIYSPTFPPFLSIY 376
           Q LLPGLPDH+AQLCLS +PP  + +VC  WR+L+Y+P+FPPFLS+Y
Sbjct: 54  QPLLPGLPDHLAQLCLSTLPPRLVHAVCRPWRRLLYAPSFPPFLSLY 100


Top