BLASTX nr result

ID: Lithospermum22_contig00043935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043935
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517612.1| pentatricopeptide repeat-containing protein,...   127   7e-28
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]                         125   3e-27
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_002891705.1| pentatricopeptide repeat-containing protein ...   122   3e-26
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 794

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/102 (58%), Positives = 80/102 (78%)
 Frame = -1

Query: 309 FACNALLHELARNGKVEDSLRVYREMTEENSGKNGELFLLDNYSTCIVMRGLCKAGRVED 130
           F+CN+LL+ L ++GKVE + +VY EM +    +NGE+   DNY+ CI+++GLCK G+VED
Sbjct: 138 FSCNSLLNVLVKHGKVEIACKVYDEMVD----RNGEV---DNYTVCIMVKGLCKEGKVED 190

Query: 129 GSKLIEDRWGKGCIPNIVFYNILINGYCKRGDVGRAYQVFKE 4
           G KLIE RWG+GC+PNIVFYN LI+GYCK+GD  RA  +FKE
Sbjct: 191 GWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKE 232


>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/102 (57%), Positives = 74/102 (72%)
 Frame = -1

Query: 309 FACNALLHELARNGKVEDSLRVYREMTEENSGKNGELFLLDNYSTCIVMRGLCKAGRVED 130
           FACN+LL+ L  +GKVE + +VY EM + N         +DNY+ CIV +GLCK G+VE+
Sbjct: 168 FACNSLLNLLVHHGKVEIARKVYDEMVDRNGD-------VDNYTVCIVTKGLCKEGKVEE 220

Query: 129 GSKLIEDRWGKGCIPNIVFYNILINGYCKRGDVGRAYQVFKE 4
           G  LIE RWGKGC+PNIVFYN LI+GYCK GD+ RA  +FKE
Sbjct: 221 GRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKE 262


>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
           gi|449484425|ref|XP_004156880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/102 (52%), Positives = 80/102 (78%)
 Frame = -1

Query: 309 FACNALLHELARNGKVEDSLRVYREMTEENSGKNGELFLLDNYSTCIVMRGLCKAGRVED 130
           +ACN+LL+ L ++ ++E + ++Y EM + +   NG+   +DNY+T I+++GLC  GR+ED
Sbjct: 170 YACNSLLNLLVKHRRIETAHQLYDEMIDRD---NGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 129 GSKLIEDRWGKGCIPNIVFYNILINGYCKRGDVGRAYQVFKE 4
           G KLIE RWGKGC+PNIVFYN LI+GYCK+G+V  AY++FK+
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKK 268


>ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337547|gb|EFH67964.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 823

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/101 (55%), Positives = 73/101 (72%)
 Frame = -1

Query: 306 ACNALLHELARNGKVEDSLRVYREMTEENSGKNGELFLLDNYSTCIVMRGLCKAGRVEDG 127
           ACNALL  + ++ ++ED+ +VY EM E           +DNYSTCI+++G+C  G+VE+G
Sbjct: 172 ACNALLSLVVKSRRLEDARKVYDEMCERGG-------CVDNYSTCIMVKGMCSEGKVEEG 224

Query: 126 SKLIEDRWGKGCIPNIVFYNILINGYCKRGDVGRAYQVFKE 4
            KLIEDRWGKGC+PNIVFYN +I GYCK GD+  A  VFKE
Sbjct: 225 RKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKE 265


>ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|222833859|gb|EEE72336.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/101 (58%), Positives = 72/101 (71%)
 Frame = -1

Query: 306 ACNALLHELARNGKVEDSLRVYREMTEENSGKNGELFLLDNYSTCIVMRGLCKAGRVEDG 127
           ACNALL+ L +  KVE + +VY EM + +          DNYS CI++RGLCK  +VE+G
Sbjct: 172 ACNALLNALIQQKKVEIARKVYEEMVKRDG-------CWDNYSVCIMVRGLCKERKVEEG 224

Query: 126 SKLIEDRWGKGCIPNIVFYNILINGYCKRGDVGRAYQVFKE 4
            KLI DRWGKGCIPNIVFYN L++GY KRGDV RA  +FKE
Sbjct: 225 RKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKE 265


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