BLASTX nr result

ID: Lithospermum22_contig00043929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043929
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   137   9e-31
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   130   1e-28
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   129   2e-28
ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   129   2e-28
ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   127   7e-28

>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis]
           gi|223535945|gb|EEF37604.1| Protein AFR, putative
           [Ricinus communis]
          Length = 345

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +2

Query: 260 MSAIIEGLPDAVAIRCLARVPFYLHPKLELVSHSWRDAYRSGELYKARQEVNATEELLCV 439
           MS +IEGLPDA+AIRC+ARVPFYLHPKLELVSHSWR A RS EL+KARQEV + E+LLCV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 440 CAFEPDNLWQLYDPL 484
           CAFEP+NLWQLYDPL
Sbjct: 61  CAFEPENLWQLYDPL 75


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
           gi|222842558|gb|EEE80105.1| f-box family protein
           [Populus trichocarpa]
          Length = 345

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = +2

Query: 260 MSAIIEGLPDAVAIRCLARVPFYLHPKLELVSHSWRDAYRSGELYKARQEVNATEELLCV 439
           MS +IEGLPDAVAIRC+ARVPFYLHPKLE+VS SW+ A RS EL+KARQEV + E+LLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 440 CAFEPDNLWQLYDPL 484
           CAF+P+NLWQLYDPL
Sbjct: 61  CAFDPENLWQLYDPL 75


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/74 (79%), Positives = 66/74 (89%)
 Frame = +2

Query: 260 MSAIIEGLPDAVAIRCLARVPFYLHPKLELVSHSWRDAYRSGELYKARQEVNATEELLCV 439
           MS +IEGLPDAVAIRC+ARVPFYLHPKLELVS SWR   RS EL+KARQEV + E+LLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 440 CAFEPDNLWQLYDP 481
           CAF+P+NLWQLYDP
Sbjct: 61  CAFDPENLWQLYDP 74


>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
           vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
           vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
           vinifera]
          Length = 345

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/74 (78%), Positives = 67/74 (90%)
 Frame = +2

Query: 260 MSAIIEGLPDAVAIRCLARVPFYLHPKLELVSHSWRDAYRSGELYKARQEVNATEELLCV 439
           MS +IEGLPDAVA+RCLA VPFYLHP+LELVS SWRDA R  EL+KARQEV ++E+LLCV
Sbjct: 1   MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 440 CAFEPDNLWQLYDP 481
           CAF+P+NLWQLYDP
Sbjct: 61  CAFDPENLWQLYDP 74


>ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/75 (78%), Positives = 67/75 (89%)
 Frame = +2

Query: 260 MSAIIEGLPDAVAIRCLARVPFYLHPKLELVSHSWRDAYRSGELYKARQEVNATEELLCV 439
           MS +IEGLPDAVAIRCLARVPFYLHP LELVS SW+ A  S EL+KARQEV +TE+LLCV
Sbjct: 1   MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAICSPELFKARQEVGSTEDLLCV 60

Query: 440 CAFEPDNLWQLYDPL 484
           CAF+P+NLWQLYDP+
Sbjct: 61  CAFDPENLWQLYDPM 75


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