BLASTX nr result

ID: Lithospermum22_contig00043900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043900
         (193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
gb|ADE76378.1| unknown [Picea sitchensis]                              69   4e-10
emb|CAJ19338.1| mechanosensitive ion channel [Triticum aestivum]       68   7e-10
ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot...    67   1e-09

>ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|222856412|gb|EEE93959.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/49 (65%), Positives = 43/49 (87%)
 Frame = -1

Query: 193 MRRATLVEEMVKIFRELDIEYRLLPVDLNVRNLPPLTSTRLPSNWSACA 47
           +RR  L+ EM+K+F+ELDIEYR+LP+D+N+RN+PPL S RLPSNW+ CA
Sbjct: 251 VRRNLLLGEMIKVFKELDIEYRVLPLDVNIRNMPPLVSNRLPSNWTTCA 299


>ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|222860505|gb|EEE98052.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/46 (65%), Positives = 43/46 (93%)
 Frame = -1

Query: 193 MRRATLVEEMVKIFRELDIEYRLLPVDLNVRNLPPLTSTRLPSNWS 56
           +RR+ L++EM++IFRELD++YRLLP+D+NVR LPP+TS RLP+NW+
Sbjct: 510 VRRSLLLDEMMRIFRELDMQYRLLPLDINVRALPPVTSDRLPANWT 555


>gb|ADE76378.1| unknown [Picea sitchensis]
          Length = 290

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -1

Query: 193 MRRATLVEEMVKIFRELDIEYRLLPVDLNVRNLPPLTSTRLPSNW 59
           +RR+ LVEEM+ IFR+LDIEYRLLP D+N+R +P +TS+RLPS W
Sbjct: 245 LRRSRLVEEMINIFRDLDIEYRLLPRDVNLRTMPAVTSSRLPSTW 289


>emb|CAJ19338.1| mechanosensitive ion channel [Triticum aestivum]
          Length = 297

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = -1

Query: 190 RRATLVEEMVKIFRELDIEYRLLPVDLNVRNLPPLTSTRLPSNWS 56
           RR  +++EM+KI R+LDIEYR+LP+D+NVRN PP+ STR+P+ W+
Sbjct: 250 RRELILQEMMKILRDLDIEYRMLPLDINVRNAPPINSTRMPTTWA 294


>ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
            sativus]
          Length = 923

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = -1

Query: 190  RRATLVEEMVKIFRELDIEYRLLPVDLNVRNLPPLTSTRLP 68
            RRA LVEE+VKIF+ELD++YRLLP+D+NVR+LPP+ ST LP
Sbjct: 881  RRALLVEELVKIFQELDLQYRLLPLDINVRSLPPVNSTNLP 921


Top