BLASTX nr result

ID: Lithospermum22_contig00043894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043894
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281496.1| PREDICTED: uncharacterized protein LOC100263...    98   6e-19
emb|CAN80342.1| hypothetical protein VITISV_003130 [Vitis vinifera]    98   6e-19
ref|XP_002299896.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244...    74   2e-11
ref|XP_003539097.1| PREDICTED: uncharacterized protein LOC100807...    72   6e-11

>ref|XP_002281496.1| PREDICTED: uncharacterized protein LOC100263778 [Vitis vinifera]
          Length = 259

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = -3

Query: 303 MKSIELFCASPSSTAICSSMEQYSMVRHGMKQLDRHTHGLGDRLKTR---TPPCLSERPF 133
           MK ++LFCASP+STAICSSM+Q SMVR G + ++ H   L DR ++R     PC S  P 
Sbjct: 1   MKGVDLFCASPASTAICSSMDQRSMVRRGTRPINHHNPYLSDRRRSRPLAPVPCSSRLPI 60

Query: 132 NPRPSFHQKSRKSSSRPNEIRRKSSADISNLRHNSPSTSSRYLL 1
           +P    H KSRKSS++  ++RRKSSAD ++L   SP  SSRYLL
Sbjct: 61  SP-TLHHHKSRKSSAKQTDLRRKSSADKNDL--TSPPGSSRYLL 101


>emb|CAN80342.1| hypothetical protein VITISV_003130 [Vitis vinifera]
          Length = 265

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = -3

Query: 303 MKSIELFCASPSSTAICSSMEQYSMVRHGMKQLDRHTHGLGDRLKTR---TPPCLSERPF 133
           MK ++LFCASP+STAICSSM+Q SMVR G + ++ H   L DR ++R     PC S  P 
Sbjct: 1   MKGVDLFCASPASTAICSSMDQRSMVRRGTRPINHHNPYLSDRRRSRPLAPVPCSSRLPI 60

Query: 132 NPRPSFHQKSRKSSSRPNEIRRKSSADISNLRHNSPSTSSRYLL 1
           +P    H KSRKSS++  ++RRKSSAD ++L   SP  SSRYLL
Sbjct: 61  SP-TLHHHKSRKSSAKQTDLRRKSSADKNDL--TSPPGSSRYLL 101


>ref|XP_002299896.1| predicted protein [Populus trichocarpa] gi|222847154|gb|EEE84701.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 19/117 (16%)
 Frame = -3

Query: 294 IELFCASPSSTAICSSMEQYSMVRHGMKQLDRHTHGLGDRLKTRTPPCLSERPFNPRPSF 115
           ++LFCASP+STAICSS++  S+VRHG + LDR +          TP C SE P +P   +
Sbjct: 1   MDLFCASPASTAICSSLDHRSIVRHGTRPLDRKS-----SKSDYTPACSSELPPSPCSPY 55

Query: 114 HQKS--------RKSSS----------RPNEIRRKSSADISNLRHNS-PSTSSRYLL 1
            +KS        RKSS+          + + +RRKSSADIS+L+    P +SSR+LL
Sbjct: 56  SRKSSAKQRDLYRKSSAEDSRSVISSVKQSYLRRKSSADISDLQSRPVPGSSSRHLL 112


>ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244737 [Vitis vinifera]
           gi|297741533|emb|CBI32665.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 32/133 (24%)
 Frame = -3

Query: 303 MKSIELFCASPSSTAICSSME----QYSMVRHGMKQLDRHTHGLGD----RLKTRTPPCL 148
           MK I++FCAS +STAIC SME      S +  G + +DRH   + D     +KT T PC 
Sbjct: 1   MKGIDIFCASQASTAICVSMEPGSSSSSAIDQGGRAIDRHNPIIRDARRSSVKTLTTPCS 60

Query: 147 SERPFNPRP--SFHQKSR----------------------KSSSRPNEIRRKSSADISNL 40
           S+ P NP+P    HQK+R                      KSS++P ++ RKSSA   +L
Sbjct: 61  SQSPINPKPYHQLHQKNRKTTGKSNDQIKKASAKNVDQYGKSSAKPLDMLRKSSAKFVDL 120

Query: 39  RHNSPSTSSRYLL 1
              SP  SSRYLL
Sbjct: 121 --ISPPGSSRYLL 131


>ref|XP_003539097.1| PREDICTED: uncharacterized protein LOC100807544 [Glycine max]
          Length = 240

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
 Frame = -3

Query: 303 MKSIELFCASPSSTAICSSMEQYSMVRHGMKQLDRHTHGLGDRLKTRT-PPCLSERPFNP 127
           MK I+LFC+S +STA+ SSM   SMV    K  D       DR K++   PC S+ P NP
Sbjct: 1   MKGIDLFCSSSASTAVNSSMHHRSMVHRSTKSFDH------DRRKSQLHVPCSSQLPINP 54

Query: 126 RP-SFHQKSRKSSSRPN----EIRRKSSADISNL--RHNSPSTSSRYLL 1
           +P ++ +K RKSS+  +    ++RRKSSAD+++L     +  +S RYLL
Sbjct: 55  KPYNYFEKHRKSSASADKQNCDVRRKSSADVNDLYTHAGADGSSRRYLL 103


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