BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043886
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...    85   5e-15
emb|CBI33742.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10

>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/95 (48%), Positives = 62/95 (65%)
 Frame = +3

Query: 48  MPSASLVITPPKPSHTPAPEHPTYPPSSYNLSFVIHKAKNITHLNQIHSYLIRRGLETDP 227
           M S +L  TPP PS T A      P    NL+ +I  +K+  HL QIH+ L+RRGL   P
Sbjct: 1   MTSTTLFTTPPPPSTTSAA-----PVDKDNLALLIDNSKSTHHLLQIHAALLRRGLHHHP 55

Query: 228 VLNFKLQKAYTSLGNLDYATTLFKQYPNPNVYYYT 332
           +LNFKLQ++Y SLG+L ++ TLF + PNPNV+ +T
Sbjct: 56  ILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWT 90


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 6/102 (5%)
 Frame = +3

Query: 48  MPSASLVITPPK----PSHTPAPEHPT--YPPSSYNLSFVIHKAKNITHLNQIHSYLIRR 209
           M SA+   +PP      S+T      T   PPS+  L+ +I K+K+I +L+QIH++L R 
Sbjct: 1   MSSAAFFPSPPPLLPLQSNTKTSRSITNVQPPSAEKLAIIIDKSKSINNLHQIHAFLYRH 60

Query: 210 GLETDPVLNFKLQKAYTSLGNLDYATTLFKQYPNPNVYYYTT 335
            L   P+L+FKLQ++Y+SLG+L+++ TLF Q  NPNV++YT+
Sbjct: 61  NLHHHPILSFKLQRSYSSLGHLNHSLTLFNQTQNPNVFFYTS 102


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +3

Query: 48  MPSASLVITPPKPSHTPAPEHPT--YPPSSYNLSFVIHKAKNITHLNQIHSYLIRRGLET 221
           M S +L   PP P+    P   T  +  S+  L+ +I K+K I+HL QIH+ L R GL+ 
Sbjct: 1   MSSTTLFTIPPSPATGSPPTTSTTHHFISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDH 60

Query: 222 DPVLNFKLQKAYTSLGNLDYATTLFKQYPNPNVYYYT 332
            P+LNFKLQ++Y SLG LDY+  LF +  NP+V+++T
Sbjct: 61  HPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWT 97


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +3

Query: 48  MPSASLVITPPKPSHTPAPEHPT--YPPSSYNLSFVIHKAKNITHLNQIHSYLIRRGLET 221
           M S +L   PP P+    P   T  +  S+  L+ +I K+K I+HL QIH+ L R GL+ 
Sbjct: 1   MSSTTLFTIPPSPATGSPPTTSTTHHFISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDH 60

Query: 222 DPVLNFKLQKAYTSLGNLDYATTLFKQYPNPNVYYYT 332
            P+LNFKLQ++Y SLG LDY+  LF +  NP+V+++T
Sbjct: 61  HPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWT 97


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = +3

Query: 45  SMPSASLVITPPKPSHTPAPEHPTYPPSSYN----LSFVIHKAKNITHLNQIHSYLIRRG 212
           S PS   + T  + S  P+          +      + +I K+K++ HL QIH+ L+RRG
Sbjct: 15  SHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASLLRRG 74

Query: 213 LETDPVLNFKLQKAYTSLGNLDYATTLFKQYPNPNVYYYT 332
           L  +P+LNFKLQ++Y +LG LD +  +F  +  PNV+ ++
Sbjct: 75  LYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFS 114