BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043884
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    59   2e-18
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    58   6e-17
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    55   3e-14
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    55   3e-14
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   3e-14

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 58.9 bits (141), Expect(2) = 2e-18
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = +1

Query: 160 LGKQAWRIAWDLGSQIALLYKAKYFPYCSF*DATLGQAPSLT*RSLLGARDLLIKGVIWQ 339
           L KQ WR+     S +A ++KA+YFP  SF DA +G  PS T RS++G+R LL  G+ W+
Sbjct: 115 LAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRWR 174

Query: 340 DSQHGLSTSYRF 375
              +G S S ++
Sbjct: 175 VG-NGASISVKY 185



 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = +2

Query: 2   TYVMQYFKLSLKICHDINSCIANYWWDTTNNKNKIHWVDFDKLCQDKAEGALAW 163
           TY+M  F+L   +CH+I S + N+WW       KIHW  + +LC+ K +G + +
Sbjct: 51  TYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGF 104


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 57.8 bits (138), Expect(2) = 6e-17
 Identities = 31/72 (43%), Positives = 45/72 (62%)
 Frame = +1

Query: 160 LGKQAWRIAWDLGSQIALLYKAKYFPYCSF*DATLGQAPSLT*RSLLGARDLLIKGVIWQ 339
           L KQ WR+     S +A ++KA+YFP  SF DA +G  PS T RS++G+R LL  G+ W+
Sbjct: 115 LAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRWR 174

Query: 340 DSQHGLSTSYRF 375
              +G S S ++
Sbjct: 175 VG-NGASISVKY 185



 Score = 54.3 bits (129), Expect(2) = 6e-17
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 2   TYVMQYFKLSLKICHDINSCIANYWWDTTNNKNKIHWVDFDKLCQDKAEGALAW 163
           TY+M  F+L   +C +I S + N+WW       KIHW  + +LC+ K  G + +
Sbjct: 51  TYIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGGMGF 104


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 55.1 bits (131), Expect(2) = 3e-14
 Identities = 28/59 (47%), Positives = 37/59 (62%)
 Frame = +1

Query: 160  LGKQAWRIAWDLGSQIALLYKAKYFPYCSF*DATLGQAPSLT*RSLLGARDLLIKGVIW 336
            LG+Q WR+  D  S  + + K +YFP  SF +A   ++PS T RSLL  R+LL KGV W
Sbjct: 881  LGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRW 939



 Score = 48.1 bits (113), Expect(2) = 3e-14
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +2

Query: 5   YVMQYFKLSLKICHDINSCIANYWWDTTNNKNKIHWVDFDKLCQDKAEGALAW 163
           YVM  F++ + IC  + +CIA++WW   + K K+HW  +  L   K  G + +
Sbjct: 818 YVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGF 870


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 55.1 bits (131), Expect(2) = 3e-14
 Identities = 28/59 (47%), Positives = 37/59 (62%)
 Frame = +1

Query: 160  LGKQAWRIAWDLGSQIALLYKAKYFPYCSF*DATLGQAPSLT*RSLLGARDLLIKGVIW 336
            LG+Q WR+  D  S  + + K +YFP  SF +A   ++PS T RSLL  R+LL KGV W
Sbjct: 838  LGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRW 896



 Score = 48.1 bits (113), Expect(2) = 3e-14
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +2

Query: 5   YVMQYFKLSLKICHDINSCIANYWWDTTNNKNKIHWVDFDKLCQDKAEGALAW 163
           YVM  F++ + IC  + +CIA++WW   + K K+HW  +  L   K  G + +
Sbjct: 775 YVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGF 827


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 53.9 bits (128), Expect(2) = 3e-14
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +1

Query: 160  LGKQAWRIAWDLGSQIALLYKAKYFPYCSF*DATLGQAPSLT*RSLLGARDLLIKGVIWQ 339
            LG+QAWR+  +  S +  + KAKYFP C F +A LG + S +  S+  ++ LL +GVIW+
Sbjct: 870  LGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSSIWSSKALLKEGVIWR 929



 Score = 48.9 bits (115), Expect(2) = 3e-14
 Identities = 18/54 (33%), Positives = 32/54 (59%)
 Frame = +2

Query: 2   TYVMQYFKLSLKICHDINSCIANYWWDTTNNKNKIHWVDFDKLCQDKAEGALAW 163
           TY+M  +K  + I   I S +A +WW +++ + KIHW ++D +C  K  G + +
Sbjct: 806 TYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGF 859