BLASTX nr result

ID: Lithospermum22_contig00043844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043844
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   108   3e-22
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]    71   8e-11
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    71   1e-10
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    71   1e-10
ref|XP_003553092.1| PREDICTED: uncharacterized protein LOC100807...    70   1e-10

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/80 (66%), Positives = 67/80 (83%)
 Frame = -2

Query: 296 LNTILLDLRNIDVYVDDEDAALILLVSLPASYENFKESMTNGKDSITLEEVRAALHNREL 117
           LNT+LL+LRNIDV ++DEDAALILLVSLP S+ENF +S   GKD+++LEEVR+ALH+REL
Sbjct: 122 LNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSREL 181

Query: 116 RHSCSGSSLDTQAVGLFANS 57
           RH  +G+S D Q  GLF +S
Sbjct: 182 RHKANGTSTDIQPSGLFTSS 201


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 55/80 (68%)
 Frame = -2

Query: 293 NTILLDLRNIDVYVDDEDAALILLVSLPASYENFKESMTNGKDSITLEEVRAALHNRELR 114
           N  ++DLRNID+ +DDED A+ L+ SLP SY +F ++M  G+D++++E+VR AL+ REL+
Sbjct: 577 NKTIMDLRNIDIRIDDEDQAMTLISSLPNSYGHFVDTMMYGRDTLSIEDVREALNLRELK 636

Query: 113 HSCSGSSLDTQAVGLFANSN 54
              S S  D    G++  ++
Sbjct: 637 KRVSESRKDDFDEGIYLKND 656


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/75 (46%), Positives = 52/75 (69%)
 Frame = -2

Query: 293 NTILLDLRNIDVYVDDEDAALILLVSLPASYENFKESMTNGKDSITLEEVRAALHNRELR 114
           N I+LDL  + V V++ED A+ILL SLP+SYENF ++M  G++SI+  +V+ AL ++EL+
Sbjct: 126 NRIILDLNGVGVKVEEEDQAMILLCSLPSSYENFVDTMMYGRBSISXNDVKDALQSKELQ 185

Query: 113 HSCSGSSLDTQAVGL 69
              SGS   +   GL
Sbjct: 186 KLVSGSEEGSVETGL 200


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/60 (53%), Positives = 46/60 (76%)
 Frame = -2

Query: 293 NTILLDLRNIDVYVDDEDAALILLVSLPASYENFKESMTNGKDSITLEEVRAALHNRELR 114
           N I+LDL NID+ + DED A++LL SL ASY N K+++  G+DS+T +EV++ LH REL+
Sbjct: 126 NKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHARELQ 185


>ref|XP_003553092.1| PREDICTED: uncharacterized protein LOC100807161 [Glycine max]
          Length = 2650

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = -2

Query: 293 NTILLDLRNIDVYVDDEDAALILLVSLPASYENFKESMTNGKDSITLEEVRAALHNREL 117
           N +LLDL NI V +DD+D AL+LL SLP SY +FKE++  GKDS++L EV+ AL ++EL
Sbjct: 15  NKLLLDLENIYVTIDDKDQALLLLCSLPKSYSHFKETLLFGKDSVSLNEVQVALSSKEL 73


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