BLASTX nr result

ID: Lithospermum22_contig00043807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043807
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...   125   7e-27
ref|XP_002517612.1| pentatricopeptide repeat-containing protein,...   119   6e-25
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]                         115   9e-24
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22

>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
            [Vitis vinifera]
          Length = 879

 Score =  130 bits (328), Expect = 2e-28
 Identities = 62/118 (52%), Positives = 88/118 (74%)
 Frame = +1

Query: 13   NEKSLFLDVYDRMILDGYLSRTAAYNAILLCLCLNRMLKIALHFRSKIANICCLSNSVTF 192
            N++S+FL+ + RMI DG+  R+AAYN+IL+CLC   M + AL   +K+ +  C+ +SV+F
Sbjct: 687  NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746

Query: 193  ASLLHGICLEGKSTEWKNIIPFNLNEEELEVAIRYSLMFDQYLAHDSTSEASKILQSL 366
             +LLHG+CLEG+S EWKNI+  NLNE EL++A+ YS + DQYL    TSEAS ILQ++
Sbjct: 747  VALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLP-QGTSEASVILQTM 803


>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
            [Cucumis sativus] gi|449484425|ref|XP_004156880.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  125 bits (315), Expect = 7e-27
 Identities = 58/119 (48%), Positives = 85/119 (71%)
 Frame = +1

Query: 13   NEKSLFLDVYDRMILDGYLSRTAAYNAILLCLCLNRMLKIALHFRSKIANICCLSNSVTF 192
            N +S+F D + RMI DG+  + AAYN IL+CLC  RM+K AL  R+K+      S++V+F
Sbjct: 691  NSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSF 750

Query: 193  ASLLHGICLEGKSTEWKNIIPFNLNEEELEVAIRYSLMFDQYLAHDSTSEASKILQSLV 369
             +L+HGICLEG S EW+N+I  +LNE EL++A++YSL  D+++     SEAS ILQ+++
Sbjct: 751  VALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMI 809


>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 794

 Score =  119 bits (298), Expect = 6e-25
 Identities = 58/120 (48%), Positives = 83/120 (69%)
 Frame = +1

Query: 16   EKSLFLDVYDRMILDGYLSRTAAYNAILLCLCLNRMLKIALHFRSKIANICCLSNSVTFA 195
            E SL L+ +  MI DG+  R A+YN+IL+CLC ++M+K ALH R K+ +   L + V+  
Sbjct: 654  ENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLV 713

Query: 196  SLLHGICLEGKSTEWKNIIPFNLNEEELEVAIRYSLMFDQYLAHDSTSEASKILQSLVNR 375
            +LLHG+CLEG+S +W N+I   LNE EL+VA++YS   D +L+   TSEAS IL SL ++
Sbjct: 714  ALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773


>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  115 bits (288), Expect = 9e-24
 Identities = 55/123 (44%), Positives = 85/123 (69%)
 Frame = +1

Query: 7    SGNEKSLFLDVYDRMILDGYLSRTAAYNAILLCLCLNRMLKIALHFRSKIANICCLSNSV 186
            S ++ +L L+ +  MI DG+  R AAYN+ILLCLC ++M+K AL    K+ +     + V
Sbjct: 680  SNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPV 739

Query: 187  TFASLLHGICLEGKSTEWKNIIPFNLNEEELEVAIRYSLMFDQYLAHDSTSEASKILQSL 366
            +F +LLHG+CLEG+  +W N+IP N NE +L++A++YS   DQ+L+   TS+AS +LQ+L
Sbjct: 740  SFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTL 799

Query: 367  VNR 375
            V +
Sbjct: 800  VEK 802


>ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|222833859|gb|EEE72336.1|
            predicted protein [Populus trichocarpa]
          Length = 826

 Score =  110 bits (275), Expect = 3e-22
 Identities = 52/116 (44%), Positives = 78/116 (67%)
 Frame = +1

Query: 22   SLFLDVYDRMILDGYLSRTAAYNAILLCLCLNRMLKIALHFRSKIANICCLSNSVTFASL 201
            SL +D +  MI DG+  R AAYN++L+CLC ++M+  AL  R K+       + V+FA+L
Sbjct: 691  SLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAAL 750

Query: 202  LHGICLEGKSTEWKNIIPFNLNEEELEVAIRYSLMFDQYLAHDSTSEASKILQSLV 369
            ++G+CLEG+S EWKN I   LNE EL++A++YS   + +L    TSEASK+  +L+
Sbjct: 751  VYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLL 806


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