BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043802
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sa...   167   1e-39
gb|ACG30634.1| hypothetical protein [Zea mays]                        167   1e-39
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fra...   162   2e-38
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom...   159   2e-37
ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicag...   159   2e-37

>ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
           gi|297840977|ref|XP_002888370.1| photosystem I assembly
           protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
           gi|78675169|dbj|BAE47595.1| photosystem I assembly
           protein ycf3 [Lactuca sativa]
           gi|255631288|gb|ACU16011.1| unknown [Glycine max]
           gi|297334211|gb|EFH64629.1| photosystem I assembly
           protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
           gi|225200|prf||1211235AE ORF 82
          Length = 82

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 182
           QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL
Sbjct: 4   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63

Query: 183 PQAFNNMAVICHYVRLSPL 239
           PQAFNNMAVICHYVRLSPL
Sbjct: 64  PQAFNNMAVICHYVRLSPL 82


>gb|ACG30634.1| hypothetical protein [Zea mays]
          Length = 82

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 3   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 182
           QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL
Sbjct: 4   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63

Query: 183 PQAFNNMAVICHYVRLSPL 239
           PQAFNNMAVICHYVRLSPL
Sbjct: 64  PQAFNNMAVICHYVRLSPL 82


>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fraxinus chinensis]
          Length = 80

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +3

Query: 3   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 182
           QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL
Sbjct: 4   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63

Query: 183 PQAFNNMAVICHYVRLS 233
           PQAFNNMAVICHYVRLS
Sbjct: 64  PQAFNNMAVICHYVRLS 80


>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
           gi|340549408|gb|AEK53230.1| hypothetical chloroplast
           RF34 (chloroplast) [Boea hygrometrica]
          Length = 171

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 182
           QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL
Sbjct: 48  QSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 107

Query: 183 PQAFNNMAVICHYVR 227
           PQAFNNMAVICHYVR
Sbjct: 108 PQAFNNMAVICHYVR 122


>ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
           gi|355507096|gb|AES88238.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
          Length = 135

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 15  NYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 194
           NYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF
Sbjct: 61  NYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 120

Query: 195 NNMAVICHYVRLSPL 239
           NNMAVICHYVRLSPL
Sbjct: 121 NNMAVICHYVRLSPL 135