BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043689
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   171   1e-40
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   163   2e-38
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   163   3e-38
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra...   158   1e-36
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t...   151   9e-35

>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
           gi|223535482|gb|EEF37151.1| ubiquitin protein ligase
           E3a, putative [Ricinus communis]
          Length = 1561

 Score =  171 bits (432), Expect = 1e-40
 Identities = 93/159 (58%), Positives = 114/159 (71%), Gaps = 11/159 (6%)
 Frame = +3

Query: 213 METRGQKRTDIVEELPADKRACSSLDFRPXXXXXXAQTLMSPPN---EPRDADMDTSSST 383
           M  RGQKRT++++ELPADKRACSSL+FRP       QT ++  N   E  +ADMDTSSS 
Sbjct: 1   MGNRGQKRTEVIDELPADKRACSSLEFRPSSSNSSIQTHVNSTNSTPETHEADMDTSSSG 60

Query: 384 SGAR--SEGDAEKDSAYGSCDSDN------SFRDYQRYHSRGDHSKFETVLSNLSKEEEQ 539
           S +    E + E+DSAYGSCDSD+      S R++QR+ S GDH +    LSNLS+  E 
Sbjct: 61  SASSHSEEEEHERDSAYGSCDSDDAIPRHSSLRNFQRHRSLGDHGRLRNALSNLSEGTEP 120

Query: 540 SGQLAALTELCEMLSFCTDSSLSSWMADSYSPVLVKLAR 656
           SGQLAALT+LCE+LSFCTD SLSS MAD+ SPVLV+LAR
Sbjct: 121 SGQLAALTDLCEVLSFCTDDSLSSMMADTLSPVLVRLAR 159


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  163 bits (413), Expect = 2e-38
 Identities = 86/155 (55%), Positives = 109/155 (70%), Gaps = 7/155 (4%)
 Frame = +3

Query: 213 METRGQKRTDIVEELPADKRACSSLDFRPXXXXXXAQTLMSPPNEPRDADMDTSSSTSGA 392
           M +RGQKR ++V+ELPADKRAC+SLDFRP       QT M+   E  D DMDTSSS S +
Sbjct: 1   MGSRGQKRPEMVDELPADKRACTSLDFRPSTSNSSVQTQMNSTVEAHDHDMDTSSSASAS 60

Query: 393 -RSEGDAEKDSAYGSCDSDN------SFRDYQRYHSRGDHSKFETVLSNLSKEEEQSGQL 551
            +SEG+ EKDSAYGSCDSD+      + R+Y R     DH KF+ ++ +LS + E S QL
Sbjct: 61  SQSEGEPEKDSAYGSCDSDDMEQHHSTLREYHRQRLSSDHGKFKNIIYSLSGQSEPSSQL 120

Query: 552 AALTELCEMLSFCTDSSLSSWMADSYSPVLVKLAR 656
           A LTELCE+LSFCT+ S+SS  +D  SP+LVKLA+
Sbjct: 121 AVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQ 155


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  163 bits (412), Expect = 3e-38
 Identities = 88/155 (56%), Positives = 109/155 (70%), Gaps = 7/155 (4%)
 Frame = +3

Query: 213 METRGQKRTDIVEELPADKRACSSLDFRPXXXXXXAQTLMSPPNEPRDADMDTSSSTSGA 392
           M +RGQKR ++V+ELPADKRACSSLDFRP       QT M+   E  D DMDTSSS S +
Sbjct: 1   MGSRGQKRPEMVDELPADKRACSSLDFRPSTSNSSVQTQMNSTVEAHDHDMDTSSSASAS 60

Query: 393 -RSEGDAEKDSAYGSCDSDN------SFRDYQRYHSRGDHSKFETVLSNLSKEEEQSGQL 551
            +SEG+ EKDSAYGSCDSD+      +  +Y R     DH KF+T++S+LS   E S QL
Sbjct: 61  SQSEGEPEKDSAYGSCDSDDMEQHHSTLHEYHRQRLSSDHGKFKTIISSLSGLTEPSLQL 120

Query: 552 AALTELCEMLSFCTDSSLSSWMADSYSPVLVKLAR 656
           A LTELCE+LSFCT+ S+SS  +D  SP+LVKLA+
Sbjct: 121 AVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQ 155


>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1509

 Score =  158 bits (399), Expect = 1e-36
 Identities = 88/158 (55%), Positives = 109/158 (68%), Gaps = 10/158 (6%)
 Frame = +3

Query: 213 METRGQKRTDIVEELPADKRACSSLDFRPXXXXXXAQTLM---SPPNEPRDADMDTSSST 383
           ME RGQKR ++VEELPADKRAC+S DFRP       Q      S  +E  DADMDTSSS 
Sbjct: 1   MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANGTSSGHENVDADMDTSSSA 60

Query: 384 S-GARSEGDAEKDSAYGSCDSDNS------FRDYQRYHSRGDHSKFETVLSNLSKEEEQS 542
           S  +RS+ + +KDS YGSCDSD         +DYQR  S GD  K +++L++L+ E + S
Sbjct: 61  SPSSRSDEEQDKDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDQGKLKSLLASLTGETDPS 120

Query: 543 GQLAALTELCEMLSFCTDSSLSSWMADSYSPVLVKLAR 656
           GQL+ LTELCE+LSFCT+ SLSS MAD  SPVLVKL++
Sbjct: 121 GQLSELTELCEVLSFCTEESLSSVMADMLSPVLVKLSK 158


>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
           gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
           ligase 4 gi|7413563|emb|CAB86042.1| putative protein
           [Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
           ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
          Length = 1502

 Score =  151 bits (382), Expect = 9e-35
 Identities = 87/163 (53%), Positives = 106/163 (65%), Gaps = 15/163 (9%)
 Frame = +3

Query: 213 METRGQKRTDIVEELPADKRACSSLDFRPXXXXXXAQTLMS---PPNEPRDADMDTSSST 383
           ME RGQKR ++VEELPADKRAC+S DFRP       Q   +   P +E  DADMDTSSS 
Sbjct: 1   MENRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANDTNPGHENVDADMDTSSSA 60

Query: 384 SGARSEGDAEK------DSAYGSCDSDNS------FRDYQRYHSRGDHSKFETVLSNLSK 527
           S +    + E+      DS YGSCDSD         +DYQR  S GDH K +++L NL+ 
Sbjct: 61  SPSSRSDEEEQEEQDKEDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDHGKLKSLLLNLTG 120

Query: 528 EEEQSGQLAALTELCEMLSFCTDSSLSSWMADSYSPVLVKLAR 656
           E + SGQL+ LTELCE+LSF T+ SLSS MA+  SPVLVKLA+
Sbjct: 121 ETDPSGQLSRLTELCEVLSFSTEESLSSVMANMLSPVLVKLAK 163