BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043660
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28351.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   118   6e-25
ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|XP_003596787.1| Pentatricopeptide repeat-containing protein ...   117   7e-25

>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/94 (60%), Positives = 76/94 (80%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           +LSC+LKVCG L D  +G+QVHCQ IK   +E+VSVGTSLVDMYMK ++V+DGERVF +M
Sbjct: 94  SLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153

Query: 103 LERNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
             +NVVSWTSL++GY +NG+ ++AL+ F  M +E
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 ILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDMLE-R 95
           ++K+C ++ +    +Q+HCQ IK     ++++ T+L+  Y K   + D  ++F  M   +
Sbjct: 300 VIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 94  NVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
           NVVSWT++ISGY +NG  DRA+  F  M  E
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/79 (44%), Positives = 44/79 (55%)
 Frame = -3

Query: 238 EIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDMLERNVVSWTSLISGY 59
           E G QVH   IK  L   + VG S+V+MY K   V D + VF  M  RN VSW S+I+G+
Sbjct: 210 EKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269

Query: 58  ARNGMVDRALEAFGLMHVE 2
             NG+   A E F  M +E
Sbjct: 270 VTNGLDLEAFELFYRMRLE 288



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = -3

Query: 283 TLSCILKVCGS-LCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGD 107
           T S +L  C +     E G+Q H  SIK      + V ++LV MY K  N++    VF  
Sbjct: 399 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 458

Query: 106 MLERNVVSWTSLISGYARNGMVDRALEAF 20
            ++R++VSW S+ISGYA++G   ++L+ F
Sbjct: 459 QVDRDLVSWNSMISGYAQHGCGKKSLKIF 487


>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/94 (60%), Positives = 76/94 (80%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           +LSC+LKVCG L D  +G+QVHCQ IK   +E+VSVGTSLVDMYMK ++V+DGERVF +M
Sbjct: 94  SLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153

Query: 103 LERNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
             +NVVSWTSL++GY +NG+ ++AL+ F  M +E
Sbjct: 154 RVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE 187



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = -3

Query: 271 ILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDMLE-R 95
           ++K+C ++ +    +Q+HCQ IK     ++++ T+L+  Y K   + D  ++F  M   +
Sbjct: 300 VIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 94  NVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
           NVVSWT++ISGY +NG  DRA+  F  M  E
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/79 (44%), Positives = 44/79 (55%)
 Frame = -3

Query: 238 EIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDMLERNVVSWTSLISGY 59
           E G QVH   IK  L   + VG S+V+MY K   V D + VF  M  RN VSW S+I+G+
Sbjct: 210 EKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269

Query: 58  ARNGMVDRALEAFGLMHVE 2
             NG+   A E F  M +E
Sbjct: 270 VTNGLDLEAFELFYRMRLE 288



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = -3

Query: 283 TLSCILKVCGS-LCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGD 107
           T S +L  C +     E G+Q H  SIK      + V ++LV MY K  N++    VF  
Sbjct: 495 TFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 554

Query: 106 MLERNVVSWTSLISGYARNGMVDRALEAF 20
            ++R++VSW S+ISGYA++G   ++L+ F
Sbjct: 555 QVDRDLVSWNSMISGYAQHGCGKKSLKIF 583


>ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/94 (60%), Positives = 70/94 (74%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           TLSC LKVCG L D  +GRQVHCQS+K   LE+VSVGTSLVDMYMK ++ +DG  +F +M
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM 165

Query: 103 LERNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
             +NVVSWTSL+SGYARNG+ D  +     M +E
Sbjct: 166 GIKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -3

Query: 283 TLSCILKVCGS-LCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGD 107
           T S ++  C S     E G+Q+H  ++K      + V ++L+ MY K  N++  E+VF  
Sbjct: 507 TFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTR 566

Query: 106 MLERNVVSWTSLISGYARNGMVDRALEAFGLM 11
             ER++VSW S+I+GY ++G   +ALE F +M
Sbjct: 567 QEERDIVSWNSMITGYGQHGDAKKALEVFQIM 598


>ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/94 (60%), Positives = 70/94 (74%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           TLSC LKVCG L D  +GRQVHCQS+K   LE+VSVGTSLVDMYMK ++ +DG  +F +M
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM 165

Query: 103 LERNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
             +NVVSWTSL+SGYARNG+ D  +     M +E
Sbjct: 166 GIKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -3

Query: 283 TLSCILKVCGS-LCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGD 107
           T S ++  C S     E G+Q+H  ++K      + V ++L+ MY K  N++  E+VF  
Sbjct: 507 TFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTR 566

Query: 106 MLERNVVSWTSLISGYARNGMVDRALEAFGLM 11
             ER++VSW S+I+GY ++G   +ALE F +M
Sbjct: 567 QEERDIVSWNSMITGYGQHGDAKKALEVFQIM 598


>ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355485835|gb|AES67038.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/94 (58%), Positives = 69/94 (73%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           TLSC+  +C    D ++GRQVHCQ +KF L+++VSVGTSLVDMYMK +NV DG RVF +M
Sbjct: 95  TLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM 154

Query: 103 LERNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
            ERNVVSWTSL++GY+ NG+     E F  M  E
Sbjct: 155 GERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYE 188



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -3

Query: 283 TLSCILKVCGS-LCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGD 107
           T S ++  C S    AE G+Q H  +IK  L   + V ++LV MY K  N+     VF  
Sbjct: 496 TFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKR 555

Query: 106 MLERNVVSWTSLISGYARNGMVDRALEAFGLM 11
             ER++VSW S+ISGY+++G   +ALE F  M
Sbjct: 556 QKERDLVSWNSMISGYSQHGQAKKALEVFDEM 587



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 235 IGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDMLERNVVSWTSLISGYA 56
           IG QVH   +K    E + V  SL+ +Y ++  ++D   VF  M  R+ V+W S+I+GY 
Sbjct: 212 IGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYV 271

Query: 55  RNGMVDRALEAFGLMHV 5
           RNG      E F  M +
Sbjct: 272 RNGQDLEVFEIFNKMQL 288



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 TLSCILKVCGSLCDAEIGRQVHCQSIKFHLLENVSVGTSLVDMYMKMKNVKDGERVFGDM 104
           T + ++K C SL +  + + + C+++K     +  V T+L+    K K + D   +F  M
Sbjct: 297 TFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLM 356

Query: 103 LE-RNVVSWTSLISGYARNGMVDRALEAFGLMHVE 2
            E +NVVSWT++ISG  +NG  D+A+  F  M  E
Sbjct: 357 EEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRRE 391