BLASTX nr result
ID: Lithospermum22_contig00043610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00043610
(258 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 109 2e-22
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat... 109 2e-22
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat... 108 4e-22
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,... 106 2e-21
>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 109 bits (273), Expect = 2e-22
Identities = 48/79 (60%), Positives = 67/79 (84%)
Frame = +3
Query: 6 IYGEAVKNCIKLNIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLC 185
++ EA++ K +IILYNT++KGLS+ GL+L+ALQ+M++M GCSPDIWTYNL++NGLC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 186 KMGHLSDASNFVNDAMSKG 242
KMG LSDA+ +NDA++KG
Sbjct: 438 KMGCLSDANGILNDAIAKG 456
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3
Query: 42 NIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLCKMGHLSDASNFV 221
++I YNT+I G +H ++EA + +M G P+ +TYN IING CK G + +A +
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344
Query: 222 NDAMSKG 242
DAM KG
Sbjct: 345 RDAMFKG 351
>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 109 bits (273), Expect = 2e-22
Identities = 48/79 (60%), Positives = 67/79 (84%)
Frame = +3
Query: 6 IYGEAVKNCIKLNIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLC 185
++ EA++ K +IILYNT++KGLS+ GL+L+ALQ+M++M GCSPDIWTYNL++NGLC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 186 KMGHLSDASNFVNDAMSKG 242
KMG LSDA+ +NDA++KG
Sbjct: 438 KMGCLSDANGILNDAIAKG 456
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +3
Query: 42 NIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLCKMGHLSDASNFV 221
++I YNT+I G +H ++EA + +M G P+ +TYN IING CK G + +A +
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344
Query: 222 NDAMSKG 242
DAM KG
Sbjct: 345 RDAMFKG 351
>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
unnamed protein product [Vitis vinifera]
Length = 764
Score = 108 bits (271), Expect = 4e-22
Identities = 48/80 (60%), Positives = 66/80 (82%)
Frame = +3
Query: 3 DIYGEAVKNCIKLNIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGL 182
+++ EA++ +K N++L NT++KGLSQ GLIL+AL++M EM GCSPDIWTYNL+INGL
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435
Query: 183 CKMGHLSDASNFVNDAMSKG 242
CK+G +SDA N V DA++KG
Sbjct: 436 CKIGCVSDADNLVIDAIAKG 455
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 42 NIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLCKMGHLSDASNFV 221
++I YNT+I GL ++ ++EA +++M +G PD +TYN II+G CK+G + +A +
Sbjct: 284 DVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQIL 343
Query: 222 NDAMSKG 242
D KG
Sbjct: 344 RDGAFKG 350
>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
predicted protein [Populus trichocarpa]
Length = 761
Score = 106 bits (265), Expect = 2e-21
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = +3
Query: 6 IYGEAVKNCIKLNIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLC 185
++ A+ +K +ILYN +IKGL Q GLIL+ALQMM EM GCS DIWTYNL+INGLC
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 186 KMGHLSDASNFVNDAMSKG 242
KMG +SDA+N +NDA++KG
Sbjct: 438 KMGCVSDANNLMNDAIAKG 456
Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +3
Query: 42 NIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLCKMGHLSDASNFV 221
+++ YNT+I GL ++ ++EA + + ++ G PD +TYN +I+G CKMG L +A +
Sbjct: 285 DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKIL 344
Query: 222 NDAMSKG 242
A+ KG
Sbjct: 345 QGAICKG 351
>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 735
Score = 106 bits (264), Expect = 2e-21
Identities = 48/79 (60%), Positives = 66/79 (83%)
Frame = +3
Query: 6 IYGEAVKNCIKLNIILYNTIIKGLSQHGLILEALQMMQEMEGKGCSPDIWTYNLIINGLC 185
++ EA+ +K +I+LYNT+IKGLSQ GL+L+ALQ+M +M +G SPDIWTYNL+INGLC
Sbjct: 350 LFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409
Query: 186 KMGHLSDASNFVNDAMSKG 242
KMG +SDA+N +N A++KG
Sbjct: 410 KMGCVSDANNLLNAAIAKG 428
Score = 56.6 bits (135), Expect = 2e-06
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +3
Query: 6 IYGEAVKNCIKLNIILYNTIIKGLSQHGL-------ILEALQMMQEMEGKGCSPDIWTYN 164
+ + +KN + N+ +N I+GL + G+ ++EA + +M KG PD +TYN
Sbjct: 238 LLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYN 297
Query: 165 LIINGLCKMGHLSDASNFVNDAMSKG 242
II G K+G + DAS + DA KG
Sbjct: 298 TIIYGYSKVGKIQDASRILKDAKFKG 323