BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043605
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    65   7e-09
gb|AFK38936.1| unknown [Medicago truncatula]                           60   2e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    59   3e-07
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    59   3e-07
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                59   5e-07

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
 Frame = -2

Query: 310  LWRCLHNSLPTKDQLTRRGMIVGMGCVLCSDAHETL*HLLLTCPSSSRLWFTTPQSFF-- 137
            LW+ LH ++P +D+L  RG+    GC++C   +ET+ H+L  CP + ++W  T  S    
Sbjct: 1058 LWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGS 1117

Query: 136  -YHRTTMAII*GVVDQFQTQGYRESLAEVA-CVLWQIWKHRNAINFQ 2
             +  +    +  ++D  Q       L  V+  +LW +WK+RNA+ F+
Sbjct: 1118 EFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFE 1164


>gb|AFK38936.1| unknown [Medicago truncatula]
          Length = 297

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -2

Query: 310 LWRCLHNSLPTKDQLTRRGMIVGMGCVLCSDAHETL*HLLLTCPSSSRLWFTTPQSFFYH 131
           +WR   N +PT+  L RRG+++   C LC DA E+  HL + CP + ++WF +P  F   
Sbjct: 1   MWRLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHLFMACPMTLQVWFASPLGF--Q 58

Query: 130 RTTMAII*GVVDQFQTQGYRESLA-EVACV-LWQIWKHRNAINF 5
                 +   +  + +   +E LA ++ CV LW+IW  RN   F
Sbjct: 59  PPPQTDLNAWLQSWLSA--KEPLAVQLFCVCLWKIWFFRNQAIF 100


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
 Frame = -2

Query: 310  LWRCLHNSLPTKDQLTRRGMIVGMGCVLCSDAHETL*HLLLTCPSSSRLW----FTTPQS 143
            LWR L  +LP  DQ+ RRGM +   C +C D  E+  H+L TC  + ++W      TP+ 
Sbjct: 835  LWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGVPTPEF 894

Query: 142  FFYHRTTMAII*GVVDQFQTQGYRESLA------EVACVLWQIWKHRNAINF 5
             F + +  A I     QF  +  +  L           VLW++WK+RN + F
Sbjct: 895  GFQNASIFANI-----QFLFELKKMILVPDLVKRSWPWVLWRLWKNRNKLFF 941


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
 Frame = -2

Query: 310  LWRCLHNSLPTKDQLTRRGMIVGMGCVLCSDAHETL*HLLLTCPSSSRLW----FTTPQS 143
            +W+ L  +L  +D+L  RG+    GC+ C +  ET+ HLL  CP + ++W       P +
Sbjct: 1011 MWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQCPFARQVWALSLIQAPAT 1070

Query: 142  FFYHRTTMAII*GVVDQFQTQGYRESLAEVA-CVLWQIWKHRNAINFQ 2
             F   +  + I  V+   Q  G    +  V+  +LW+IWK+RN   FQ
Sbjct: 1071 GF-GTSIFSNINHVIQNSQNFGIPRHMRTVSPWLLWEIWKNRNKTLFQ 1117


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
 Frame = -2

Query: 310  LWRCLHNSLPTKDQLTRRGMIVGMGCVLCSDAHETL*HLLLTCPSSSRLW--FTTP--QS 143
            LWR L  +LPT D+LT RGM +  GC  C   +E++ H L TCP ++  W    TP  +S
Sbjct: 680  LWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPLYRS 739

Query: 142  FFYHRTTMAII*GVVDQFQTQGYRESLAEVA-CVLWQIWKHRNAINF 5
                      I  ++   Q     +S   +   +LW+IWK RN + F
Sbjct: 740  SILSNNIEDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVVF 786