BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043602
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...    92   6e-17
ref|XP_002873646.1| pentatricopeptide repeat-containing protein ...    91   8e-17
ref|NP_196912.2| pentatricopeptide repeat-containing protein [Ar...    90   2e-16

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -3

Query: 258 RTWSSSLEQXXXXXXXXXXXTPSLIAAVIDPFLLHHPSLSLGFFNWASQQPNFSHTSLSY 79
           R+WS SLEQ           +PSL+A VIDPFLLHH SL+LGFF WASQ+P F+HTS+SY
Sbjct: 27  RSWSPSLEQTLHRLGCHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISY 86

Query: 78  QALLKSLSVSKQFNII 31
           Q++LKSLS+S+QFN +
Sbjct: 87  QSVLKSLSISRQFNAV 102


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -3

Query: 258 RTWSSSLEQXXXXXXXXXXXTPSLIAAVIDPFLLHHPSLSLGFFNWASQQPNFSHTSLSY 79
           R+WS SLEQ           +PSL+A VIDPFLLHH SL+LGFF WASQ+P F+HTS+SY
Sbjct: 27  RSWSPSLEQTLHRLGCHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISY 86

Query: 78  QALLKSLSVSKQFNII 31
           Q++LKSLS+S+QFN +
Sbjct: 87  QSVLKSLSISRQFNAV 102


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/83 (54%), Positives = 57/83 (68%)
 Frame = -3

Query: 258 RTWSSSLEQXXXXXXXXXXXTPSLIAAVIDPFLLHHPSLSLGFFNWASQQPNFSHTSLSY 79
           R W+ SLE            +PSL+A VIDP LL H SL+LGFFNWASQQP F+H SL+Y
Sbjct: 29  RPWTPSLESVLHRIVSRDSLSPSLVAQVIDPCLLTHHSLALGFFNWASQQPGFTHNSLTY 88

Query: 78  QALLKSLSVSKQFNIIANVWNKI 10
            ++LKSLS+S+QFN I  V  ++
Sbjct: 89  DSILKSLSLSRQFNAIEYVLKQV 111


>ref|XP_002873646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319483|gb|EFH49905.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 634

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/83 (50%), Positives = 60/83 (72%)
 Frame = -3

Query: 258 RTWSSSLEQXXXXXXXXXXXTPSLIAAVIDPFLLHHPSLSLGFFNWASQQPNFSHTSLSY 79
           R WS S+EQ           +PSL+A VIDPFLL+H SL+LGFFNWA+QQP +SH S+SY
Sbjct: 26  RIWSPSVEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSVSY 85

Query: 78  QALLKSLSVSKQFNIIANVWNKI 10
            ++ KSLS+S+QF+ +  ++ ++
Sbjct: 86  HSIFKSLSLSRQFSAMDALFKQV 108


>ref|NP_196912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635762|sp|Q9FMU2.2|PP380_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g14080 gi|332004602|gb|AED91985.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/83 (49%), Positives = 59/83 (71%)
 Frame = -3

Query: 258 RTWSSSLEQXXXXXXXXXXXTPSLIAAVIDPFLLHHPSLSLGFFNWASQQPNFSHTSLSY 79
           R WS  +EQ           +PSL+A VIDPFLL+H SL+LGFFNWA+QQP +SH S+SY
Sbjct: 26  RIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISY 85

Query: 78  QALLKSLSVSKQFNIIANVWNKI 10
            ++ KSLS+S+QF+ +  ++ ++
Sbjct: 86  HSIFKSLSLSRQFSAMDALFKQV 108