BLASTX nr result

ID: Lithospermum22_contig00043566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043566
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532404.1| protein with unknown function [Ricinus commu...   188   5e-46
ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [...   186   2e-45
ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thalia...   183   1e-44
ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis...   182   2e-44
gb|AFK37481.1| unknown [Medicago truncatula]                          181   6e-44

>ref|XP_002532404.1| protein with unknown function [Ricinus communis]
           gi|223527900|gb|EEF29989.1| protein with unknown
           function [Ricinus communis]
          Length = 223

 Score =  188 bits (477), Expect = 5e-46
 Identities = 92/97 (94%), Positives = 96/97 (98%)
 Frame = -2

Query: 305 RYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 126
           RYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL
Sbjct: 75  RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 134

Query: 125 RAVPIEDAQEFAERENLYFMETSALESTNVEDAFMTV 15
           RAVPIEDAQEFA+RENL+FMETSALESTNVE AF+TV
Sbjct: 135 RAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTV 171


>ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
           gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related
           protein RABA4d-like [Cucumis sativus]
          Length = 223

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/97 (93%), Positives = 94/97 (96%)
 Frame = -2

Query: 305 RYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 126
           RYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL
Sbjct: 76  RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 135

Query: 125 RAVPIEDAQEFAERENLYFMETSALESTNVEDAFMTV 15
           RAVP EDAQEFAERENL+FMETSALESTNVE AF T+
Sbjct: 136 RAVPTEDAQEFAERENLFFMETSALESTNVETAFFTI 172


>ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
           gi|297834018|ref|XP_002884891.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName:
           Full=Ras-related protein RABA4d; Short=AtRABA4d
           gi|12322042|gb|AAG51065.1|AC069472_5 ras-related
           GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
           gi|9294115|dbj|BAB01966.1| GTP-binding protein-like
           [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1|
           Ras-related GTP-binding family protein [Arabidopsis
           thaliana] gi|297330731|gb|EFH61150.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D
           [Arabidopsis thaliana]
          Length = 222

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/97 (90%), Positives = 95/97 (97%)
 Frame = -2

Query: 305 RYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 126
           RYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMA+WLEELRGHADKNIVIMLIGNKCDLGSL
Sbjct: 76  RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSL 135

Query: 125 RAVPIEDAQEFAERENLYFMETSALESTNVEDAFMTV 15
           RAVP EDAQEFA+RENL+FMETSALE+TNVE AF+T+
Sbjct: 136 RAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTI 172


>ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
           gi|147789804|emb|CAN62934.1| hypothetical protein
           VITISV_008844 [Vitis vinifera]
           gi|297739720|emb|CBI29902.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/97 (92%), Positives = 94/97 (96%)
 Frame = -2

Query: 305 RYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 126
           RYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWLEELRGHADKNIVIMLIGNK DLGSL
Sbjct: 76  RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKSDLGSL 135

Query: 125 RAVPIEDAQEFAERENLYFMETSALESTNVEDAFMTV 15
           RAVP EDAQEFAERENL+FMETSALE+TNVE AF+TV
Sbjct: 136 RAVPTEDAQEFAERENLFFMETSALEATNVETAFLTV 172


>gb|AFK37481.1| unknown [Medicago truncatula]
          Length = 223

 Score =  181 bits (459), Expect = 6e-44
 Identities = 87/97 (89%), Positives = 94/97 (96%)
 Frame = -2

Query: 305 RYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSL 126
           RYRAVTSAYYRGAVGAMLVYD+TKRQSFDHMARWLEELRGHAD NIVIMLIGNKCDLG+L
Sbjct: 76  RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTL 135

Query: 125 RAVPIEDAQEFAERENLYFMETSALESTNVEDAFMTV 15
           +AVP EDAQEFA+RENL+FMETSALESTNVE AF+T+
Sbjct: 136 KAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTI 172


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