BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043558
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]    99   5e-19
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...    96   3e-18

>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/101 (47%), Positives = 66/101 (65%)
 Frame = -2

Query: 303 LQFRKMSTIITKTLKNPAKSTLNNHNVNIFKPRKWFPIPIPHRSMPEPKGEDLDFINIAH 124
           + FR  ST++    K P               R W PIP+PHR++PEP+G+DLDF+N+AH
Sbjct: 90  IPFRGFSTLLNGAAKTPNYM------------RSWNPIPVPHRTIPEPRGQDLDFVNVAH 137

Query: 123 SHLINSDWSKLEKICSFINPFRLNHILLKTQKDFVLSHGFF 1
           SHLINSDW+KL  + + + P+R+ HI+LK +KD VLS  FF
Sbjct: 138 SHLINSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLSFEFF 178


>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/104 (50%), Positives = 71/104 (68%)
 Frame = -2

Query: 312 MNHLQFRKMSTIITKTLKNPAKSTLNNHNVNIFKPRKWFPIPIPHRSMPEPKGEDLDFIN 133
           M  L FR+ ST++    +  A S     ++++ K R    IPIPHRS+PEP+G DLDF+N
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYA-SISPKFDLSLGK-RNRDSIPIPHRSIPEPRGPDLDFVN 58

Query: 132 IAHSHLINSDWSKLEKICSFINPFRLNHILLKTQKDFVLSHGFF 1
           + HSHLI+SDWSKL+ +   +  FR+ HILLKTQKD+VLS  FF
Sbjct: 59  VVHSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFF 102


>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = -2

Query: 189 PIPHRSMPEPKGEDLDFINIAHSHLINSDWSKLEKICSFINPFRLNHILLKTQKDFVLSH 10
           PIPHR++PEPKG+DLDF+N+ HSHLI+SDW KL K+ +   PFR+NHILLK QKD VLS 
Sbjct: 1   PIPHRTIPEPKGQDLDFVNVVHSHLIHSDWDKLNKLSTHFTPFRVNHILLKIQKDHVLSL 60

Query: 9   GFF 1
            FF
Sbjct: 61  EFF 63


>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/96 (45%), Positives = 62/96 (64%)
 Frame = -2

Query: 312 MNHLQFRKMSTIITKTLKNPAKSTLNNHNVNIFKPRKWFPIPIPHRSMPEPKGEDLDFIN 133
           M  + FR  ST++    K P               R W PIP+PHR++PEP+G+DLDF+N
Sbjct: 1   MISIPFRGFSTLLNGAAKTPNYM------------RSWNPIPVPHRTIPEPRGQDLDFVN 48

Query: 132 IAHSHLINSDWSKLEKICSFINPFRLNHILLKTQKD 25
           +AHSHLINSDW+KL  + + + P+R+ HI+LK +KD
Sbjct: 49  VAHSHLINSDWAKLNSMSTGLTPYRMKHIMLKIKKD 84


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = -2

Query: 192 IPIPHRSMPEPKGEDLDFINIAHSHLINSDWSKLEKICSFINPFRLNHILLKTQKDFVLS 13
           IPIPHRS PEPKG+DLDF+N+AHSHLI SDW KL K+   ++ FR+ ++LLK QKD++LS
Sbjct: 39  IPIPHRSNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLS 98

Query: 12  HGFF 1
             FF
Sbjct: 99  FEFF 102