BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043446
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   125   4e-27
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   124   8e-27
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   124   8e-27
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               123   1e-26
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   122   2e-26

>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/131 (48%), Positives = 86/131 (65%)
 Frame = -2

Query: 460 AVQGFFATSWIPKFINSTTICLIAKVQEPKMMKDFRPIS*CNVIYKCISTIIANRLKETL 281
           A+Q FFA  ++PK INST + LI K +E K MKD+RPIS CNV+YK IS IIANRLK  L
Sbjct: 383 AIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVL 442

Query: 280 NDVVGIQQTTYVPGRAISDGIMLIQELVYGYHRKSGKLRCAIKVDIMKAYDIVHWDFLWM 101
              +   Q+ +V  R + + ++L  E+V  YH+ S   RCA+K+DI KA+D V W FL  
Sbjct: 443 PKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLIN 502

Query: 100 ILDVLCYPVLF 68
           +L+ + +P  F
Sbjct: 503 VLEAMNFPPEF 513


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/133 (47%), Positives = 86/133 (64%)
 Frame = -2

Query: 460  AVQGFFATSWIPKFINSTTICLIAKVQEPKMMKDFRPIS*CNVIYKCISTIIANRLKETL 281
            AV+ FF   ++PK +N+T + LI K  E K MKD+RPIS CNVIYK IS IIANRLK  L
Sbjct: 910  AVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVL 969

Query: 280  NDVVGIQQTTYVPGRAISDGIMLIQELVYGYHRKSGKLRCAIKVDIMKAYDIVHWDFLWM 101
             + +   Q+ +V  R + + ++L  ELV  YH+ +   RCAIK+DI KA+D V W FL  
Sbjct: 970  PNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLKN 1029

Query: 100  ILDVLCYPVLFIN 62
            +L  L +P  F++
Sbjct: 1030 VLSALDFPPEFVH 1042


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/133 (48%), Positives = 85/133 (63%)
 Frame = -2

Query: 460 AVQGFFATSWIPKFINSTTICLIAKVQEPKMMKDFRPIS*CNVIYKCISTIIANRLKETL 281
           AVQ FF   ++PK INST + LI K  E + MKD+RPIS CNV+YK IS IIANRLK  L
Sbjct: 495 AVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVL 554

Query: 280 NDVVGIQQTTYVPGRAISDGIMLIQELVYGYHRKSGKLRCAIKVDIMKAYDIVHWDFLWM 101
              +   Q+ +V  R + + ++L  ELV  YH+ +   RCAIK+DI KA+D V W FL  
Sbjct: 555 PKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLIN 614

Query: 100 ILDVLCYPVLFIN 62
           +  +L +P  FI+
Sbjct: 615 VFTILGFPREFIH 627


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/133 (47%), Positives = 86/133 (64%)
 Frame = -2

Query: 460 AVQGFFATSWIPKFINSTTICLIAKVQEPKMMKDFRPIS*CNVIYKCISTIIANRLKETL 281
           A+Q FFA  ++PK +NST + LI K  E K MKD+RPIS CNV+YK IS I+ANRLK  L
Sbjct: 48  AIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLL 107

Query: 280 NDVVGIQQTTYVPGRAISDGIMLIQELVYGYHRKSGKLRCAIKVDIMKAYDIVHWDFLWM 101
              +   Q+++V  R + + ++L  +LV  YH+ S   RCAIK+DI KA D V W FL  
Sbjct: 108 PQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLIN 167

Query: 100 ILDVLCYPVLFIN 62
            L  + +P +FI+
Sbjct: 168 TLTAMHFPEMFIH 180


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/133 (45%), Positives = 87/133 (65%)
 Frame = -2

Query: 460 AVQGFFATSWIPKFINSTTICLIAKVQEPKMMKDFRPIS*CNVIYKCISTIIANRLKETL 281
           A+Q FFA  ++PK +NST + LI K +E + +KD+RPIS CNV+YK IS I+ANRLK  L
Sbjct: 216 AIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRIL 275

Query: 280 NDVVGIQQTTYVPGRAISDGIMLIQELVYGYHRKSGKLRCAIKVDIMKAYDIVHWDFLWM 101
              +   Q+ +V  R + + ++L  ELV  YH+ S   RCA+K+DI KA+D + W FL  
Sbjct: 276 PKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTH 335

Query: 100 ILDVLCYPVLFIN 62
           +L  + +P  FI+
Sbjct: 336 VLAAMNFPGEFIH 348