BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043380
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    57   1e-06
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    57   1e-06
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    57   2e-06
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    55   5e-06
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    55   8e-06

>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = -3

Query: 217 WLEIKANAEEVNWHKIEWGKGNVPAHSFITWLVCVGRFSTKDKLKKWQIIEDEHCEFCSG 38
           W  I+ ++  V W  + WG GN+P HSF  WL    R ST+D+L +W       C  C G
Sbjct: 187 WETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLSTRDRLSRWDRSIPLSCLLCGG 246


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = -3

Query: 223 DVWLEIKANAEEVNWHKIEWGKGNVPAHSFITWLVCVGRFSTKDKLKKWQIIEDEHCEFC 44
           D W  ++  +  V+WHK  W    VP H+FI+W+    R  T+D+L+ W +I    C  C
Sbjct: 568 DTWRALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLC 627

Query: 43  S 41
           +
Sbjct: 628 N 628


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = -3

Query: 217 WLEIKANAEEVNWHKIEWGKGNVPAHSFITWLVCVGRFSTKDKLKKWQIIEDEHCEFCS 41
           W+ +    E+V+WHK  W KG +P H+FI+W+    R  T+DKL  W +     C  C+
Sbjct: 132 WIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCN 190


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = -3

Query: 217 WLEIKANAEEVNWHKIEWGKGNVPAHSFITWLVCVGRFSTKDKLKKWQIIEDEHCEFCS 41
           WL +    E V+W K  W KG +P H+FI W+    R  TKD++  W  I    C FC+
Sbjct: 31  WLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCN 89


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = -3

Query: 217 WLEIKANAEEVNWHKIEWGKGNVPAHSFITWLVCVGRFSTKDKLKKWQIIEDEHCEFCS 41
           W  +   +  V WHK  W K +VP H+FI W+V   R  T+D+L+ W +     C  C+
Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCN 175