BLASTX nr result

ID: Lithospermum22_contig00043363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043363
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...    64   1e-08
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indi...    61   8e-08
emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group] gi|3...    61   8e-08
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...    57   1e-06

>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = -3

Query: 139 YSDF*GKCSVYTTENRLLEAFSQHGQVIEAKIVTDKVTERPKGFGF 2
           Y  F G  S YTTEN L EAFS +GQVIEAKIVTD+V++R KGFGF
Sbjct: 29  YKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGF 74


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = -3

Query: 130 F*GKCSVYTTENRLLEAFSQHGQVIEAKIVTDKVTERPKGFGF 2
           F G  S+YTTEN L EAFSQ+GQV+EAKIV D+  +R KGFGF
Sbjct: 42  FVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGF 84


>gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
          Length = 113

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 139 YSDF*GKCSVYTTENRLLEAFSQHGQVIEAKIVTDKVTERPKGFGF 2
           Y  F G  S + TE+ L EAFSQ+GQV+EA IVTDK+T RPKGFGF
Sbjct: 37  YRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGF 82


>emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
           gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa
           Japonica Group] gi|116309334|emb|CAH66418.1| H0622F05.1
           [Oryza sativa Indica Group] gi|116309399|emb|CAH66476.1|
           OSIGBa0137L20.5 [Oryza sativa Indica Group]
          Length = 137

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 139 YSDF*GKCSVYTTENRLLEAFSQHGQVIEAKIVTDKVTERPKGFGF 2
           Y  F G  S + TE+ L EAFSQ+GQV+EA IVTDK+T RPKGFGF
Sbjct: 37  YRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGF 82


>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -3

Query: 130 F*GKCSVYTTENRLLEAFSQHGQVIEAKIVTDKVTERPKGFGF 2
           F G  S YTTE  L E FSQ+GQV+EAKIV D+V++R KGFGF
Sbjct: 37  FVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGF 79


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