BLASTX nr result
ID: Lithospermum22_contig00043336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00043336
(471 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523547.1| pentatricopeptide repeat-containing protein,... 174 5e-42
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2... 169 3e-40
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi... 168 5e-40
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera] 168 5e-40
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi... 155 2e-36
>ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537254|gb|EEF38886.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 555
Score = 174 bits (442), Expect = 5e-42
Identities = 86/154 (55%), Positives = 115/154 (74%)
Frame = +3
Query: 9 EMVSASGFEXXXXXXXXXLPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKC 188
EM SGF LPV A + DE +AS +HCYV+K+GLD+ VT+ NALVDVYGKC
Sbjct: 101 EMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKC 160
Query: 189 GNVEESKRIFDEIIERNDVSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVM 368
GN++ S+R+FDE++ERN+VSWNAI+TS + + +AL+ RLMI E V PNS+TI+S++
Sbjct: 161 GNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASIL 220
Query: 369 PSLVELGWFTIGREIHGYSVRRSIDFDVFVSNSL 470
P LVEL F +G+EIHG+S+R I+ DVF+SNSL
Sbjct: 221 PVLVELEHFDLGKEIHGFSLRFGIESDVFISNSL 254
Score = 97.4 bits (241), Expect = 1e-18
Identities = 45/136 (33%), Positives = 82/136 (60%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LPV+ + ++ +H + L+ G+++ V + N+L+D+Y K G+ ++ +F + E+N
Sbjct: 220 LPVLVELEHFDLGKEIHGFSLRFGIESDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNV 279
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWNA+V +F+ L A++ +R M +G PN +T ++ +P+ +G+ G+EIH
Sbjct: 280 VSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPVTFTNALPACARMGFLRPGKEIHAR 339
Query: 423 SVRRSIDFDVFVSNSL 470
+ R FD FVSN+L
Sbjct: 340 AFRMGCYFDQFVSNAL 355
Score = 91.3 bits (225), Expect = 8e-17
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Frame = +3
Query: 108 VHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGR 287
+H V K+G D V VGN L+ YG G + ++K++FDE++ER+ VSWN ++ +FS G
Sbjct: 32 IHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDAKKVFDEMLERDVVSWNTLLGAFSVNGF 91
Query: 288 HLEALD-FLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGYSVRRSIDFDVFVSN 464
+L+ALD F + + G PN +T+ SV+P L + EIH Y V+ +D V + N
Sbjct: 92 YLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLDSQVTLCN 151
Query: 465 SL 470
+L
Sbjct: 152 AL 153
Score = 64.3 bits (155), Expect = 1e-08
Identities = 38/136 (27%), Positives = 69/136 (50%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP A +G +H ++G V NAL D+Y KCG + ++ +F+ I R++
Sbjct: 321 LPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLNLARNVFN-ISLRDE 379
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VS+N ++ +S E+L M + G++ + ++ V+ + L G EIH
Sbjct: 380 VSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEIHAL 439
Query: 423 SVRRSIDFDVFVSNSL 470
VR+++ +F++NSL
Sbjct: 440 VVRKNLHMHIFIANSL 455
>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
predicted protein [Populus trichocarpa]
Length = 680
Score = 169 bits (427), Expect = 3e-40
Identities = 85/154 (55%), Positives = 109/154 (70%)
Frame = +3
Query: 9 EMVSASGFEXXXXXXXXXLPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKC 188
EM SGF LPV AG+ D +HCYV+K GLD+ VTVGNALVDVYGKC
Sbjct: 98 EMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKC 157
Query: 189 GNVEESKRIFDEIIERNDVSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVM 368
G V++S+R+FDEI ERN VSWNAI+TS + R+ +AL+ RLMI GV PNS+T SS++
Sbjct: 158 GYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSML 217
Query: 369 PSLVELGWFTIGREIHGYSVRRSIDFDVFVSNSL 470
P LVEL F G+EIHG+S+R ++ D+FV+N+L
Sbjct: 218 PVLVELKLFDFGKEIHGFSLRFGLESDIFVANAL 251
Score = 105 bits (261), Expect = 5e-21
Identities = 50/136 (36%), Positives = 85/136 (62%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LPV+ + + +H + L+ GL++ + V NAL+D+Y K G ++ +F++I E+N
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNI 276
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWNA+V +F+ L A+D +R M +G PNS+T ++V+P+ +G+ G+EIH
Sbjct: 277 VSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHAR 336
Query: 423 SVRRSIDFDVFVSNSL 470
++R D+FVSN+L
Sbjct: 337 AIRTGSSVDLFVSNAL 352
Score = 96.7 bits (239), Expect = 2e-18
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +3
Query: 108 VHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGR 287
+H V K+G D+ V VGN L+ YG CG +++ KR+FDE++ER+ VSWN+++ FS G
Sbjct: 29 IHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGF 88
Query: 288 HLEALD-FLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGYSVRRSIDFDVFVSN 464
+ EA+ F + + G PN ++I SV+P L GR+IH Y V+ +D V V N
Sbjct: 89 YAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGN 148
Query: 465 SL 470
+L
Sbjct: 149 AL 150
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/136 (28%), Positives = 73/136 (53%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP A IG +H ++ G + V NAL D+Y KCG + ++R+F +I R++
Sbjct: 318 LPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDE 376
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VS+N ++ +S E+L M ++G+ + ++ V+ + L G+E+HG
Sbjct: 377 VSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGL 436
Query: 423 SVRRSIDFDVFVSNSL 470
+VR+ + +F++N+L
Sbjct: 437 AVRKHLHTHLFIANAL 452
>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 168 bits (425), Expect = 5e-40
Identities = 89/157 (56%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
Frame = +3
Query: 6 REMVSAS-GFEXXXXXXXXXLPVIAGIGDEEMASGVHCYVLKVGL-DNVVTVGNALVDVY 179
R MV+A G + LPV A D+ MA VHCY LKVGL V VGNALVDVY
Sbjct: 227 RVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVY 286
Query: 180 GKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITIS 359
GKCG+ + SK++FDEI ERN +SWNAI+TSFS G++++ALD RLMI EG+ PNS+TIS
Sbjct: 287 GKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTIS 346
Query: 360 SVMPSLVELGWFTIGREIHGYSVRRSIDFDVFVSNSL 470
S++P L ELG F +G E+HG+S++ +I+ DVF+SNSL
Sbjct: 347 SMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSL 383
Score = 102 bits (254), Expect = 3e-20
Identities = 48/136 (35%), Positives = 86/136 (63%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LPV+ +G ++ VH + LK+ +++ V + N+L+D+Y K G+ + IF+++ RN
Sbjct: 349 LPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNI 408
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWNA++ +F+ EA++ +R M +G PN++T ++V+P+ LG+ +G+EIH
Sbjct: 409 VSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHAR 468
Query: 423 SVRRSIDFDVFVSNSL 470
+R D+FVSN+L
Sbjct: 469 IIRVGSSLDLFVSNAL 484
Score = 80.9 bits (198), Expect = 1e-13
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +3
Query: 108 VHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGR 287
VH K+G D V VGN L+ YG CG ++ ++FDE+ ER+ VSWN ++ S G
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218
Query: 288 HLEALDFLRLMIV--EGVDPNSITISSVMPSLVELGWFTIGREIHGYSVR 431
+ EAL F R+M+ G+ P+ +T+ SV+P E + R +H Y+++
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALK 268
Score = 77.4 bits (189), Expect = 1e-12
Identities = 43/136 (31%), Positives = 75/136 (55%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP A +G + +H +++VG + V NAL D+Y KCG + ++ +F+ I R++
Sbjct: 450 LPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDE 508
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VS+N ++ +S LE+L M + G+ P+ ++ V+ + L + G+EIHG
Sbjct: 509 VSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGL 568
Query: 423 SVRRSIDFDVFVSNSL 470
VR+ +FV+NSL
Sbjct: 569 LVRKLFHTHLFVANSL 584
>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 168 bits (425), Expect = 5e-40
Identities = 85/154 (55%), Positives = 108/154 (70%)
Frame = +3
Query: 9 EMVSASGFEXXXXXXXXXLPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKC 188
EM SG LPV AG+ DE AS +H YV+KVGL+ V VGNAL+DVYGKC
Sbjct: 132 EMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALLDVYGKC 191
Query: 189 GNVEESKRIFDEIIERNDVSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVM 368
GNV K++F E++E+N VSWNAI+TSF G + +ALD RLMI EG+ PNSITISS +
Sbjct: 192 GNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITISSFL 251
Query: 369 PSLVELGWFTIGREIHGYSVRRSIDFDVFVSNSL 470
P LVEL +F GRE+HG S+R ++ D+F++NSL
Sbjct: 252 PVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 285
Score = 92.0 bits (227), Expect = 4e-17
Identities = 46/136 (33%), Positives = 81/136 (59%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LPV+ + + VH +++GL++ + + N+L+D+Y K G+ E+ +F ++ +N
Sbjct: 251 LPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNV 310
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWNA++ +F+ L A+ +R M G PNS+T ++V+P+ +G G+EIH
Sbjct: 311 VSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHAR 370
Query: 423 SVRRSIDFDVFVSNSL 470
S+ FD+FVSN+L
Sbjct: 371 SIHMGCAFDLFVSNAL 386
Score = 91.7 bits (226), Expect = 6e-17
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 108 VHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGR 287
VH V+K+G ++ V VGN L+ YG CG + ++ R+FDE+ E++ VSWN ++ FS G
Sbjct: 63 VHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGC 122
Query: 288 HLEALD-FLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGYSVRRSIDFDVFVSN 464
E LD F + + G+ PN +++ SV+P + EIHGY V+ ++F V V N
Sbjct: 123 WXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGN 182
Query: 465 SL 470
+L
Sbjct: 183 AL 184
Score = 64.3 bits (155), Expect = 1e-08
Identities = 37/136 (27%), Positives = 70/136 (51%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP A +G +H + +G + V NAL D+Y K G+++ ++ +FD + R++
Sbjct: 352 LPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSL-RDE 410
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VS+N ++ S E+L M + G+ ++++ + + L G+EIHG+
Sbjct: 411 VSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGF 470
Query: 423 SVRRSIDFDVFVSNSL 470
+R+ +FV+NSL
Sbjct: 471 LLRKLFHIHLFVANSL 486
>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 155 bits (393), Expect = 2e-36
Identities = 71/136 (52%), Positives = 100/136 (73%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP+ A + DEEM +HCY +KVGLD+ VT NALVD YGKCG+V+ ++F+E +E+N+
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWN+I+ +C GR +AL+ R+MI G PNS+TISS++P LVEL F G+EIHG+
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 423 SVRRSIDFDVFVSNSL 470
S+R + D+F++NSL
Sbjct: 239 SMRMGTETDIFIANSL 254
Score = 96.7 bits (239), Expect = 2e-18
Identities = 47/136 (34%), Positives = 81/136 (59%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LPV+ + + +H + +++G + + + N+L+D+Y K G+ E+ IF + RN
Sbjct: 220 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 279
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VSWNA++ +++ LEA+ F+ M G PN++T ++V+P+ LG+ G+EIH
Sbjct: 280 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 339
Query: 423 SVRRSIDFDVFVSNSL 470
VR + D+FVSNSL
Sbjct: 340 GVRIGLTSDLFVSNSL 355
Score = 87.4 bits (215), Expect = 1e-15
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 108 VHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERNDVSWNAIVTSFSCGGR 287
VH V K+G D V VGN L+ +YG CG + +++R+FDE+ ER+ VSWN I+ S G
Sbjct: 32 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGD 91
Query: 288 HLEALDFLRLMIVEGV-DPNSITISSVMPSLVELGWFTIGREIHGYSVRRSIDFDVFVSN 464
+ EA ++ MI+ V PN +++ S++P L + R IH YSV+ +D V N
Sbjct: 92 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 151
Query: 465 SL 470
+L
Sbjct: 152 AL 153
Score = 71.6 bits (174), Expect = 6e-11
Identities = 38/136 (27%), Positives = 75/136 (55%)
Frame = +3
Query: 63 LPVIAGIGDEEMASGVHCYVLKVGLDNVVTVGNALVDVYGKCGNVEESKRIFDEIIERND 242
LP A +G +H +++GL + + V N+L+D+Y KCG + ++ +F+ +++
Sbjct: 321 LPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTS-RKDE 379
Query: 243 VSWNAIVTSFSCGGRHLEALDFLRLMIVEGVDPNSITISSVMPSLVELGWFTIGREIHGY 422
VS+N ++ +S L++L+ M + G P+ ++ V+ + L G+E+HG
Sbjct: 380 VSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGV 439
Query: 423 SVRRSIDFDVFVSNSL 470
++R + +FVSNSL
Sbjct: 440 ALRNHLYSHLFVSNSL 455