BLASTX nr result

ID: Lithospermum22_contig00043156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00043156
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546805.1| PREDICTED: uncharacterized protein LOC100793...    65   6e-09
gb|ACU23151.1| unknown [Glycine max]                                   63   2e-08
gb|AFK41518.1| unknown [Lotus japonicus]                               59   3e-07
ref|XP_002513379.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002310095.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003546805.1| PREDICTED: uncharacterized protein LOC100793632 [Glycine max]
          Length = 251

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/47 (61%), Positives = 39/47 (82%)
 Frame = +3

Query: 219 GKSRVGLVTMDLLGGYCTVDSKELDLDLHVPSGFEKRLDMKSGKLYL 359
           G+    L+T DLLGG  +++S+ELDLDL VPSG+EKRLD++SGK+YL
Sbjct: 30  GEKSTALITRDLLGGSSSIESQELDLDLQVPSGWEKRLDLQSGKVYL 76


>gb|ACU23151.1| unknown [Glycine max]
          Length = 251

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/47 (59%), Positives = 39/47 (82%)
 Frame = +3

Query: 219 GKSRVGLVTMDLLGGYCTVDSKELDLDLHVPSGFEKRLDMKSGKLYL 359
           G+    L+T DLLGG  +++S+ELDLDL VPSG+EKRLD++SGK++L
Sbjct: 30  GEKSTALITRDLLGGSSSIESQELDLDLQVPSGWEKRLDLQSGKVHL 76


>gb|AFK41518.1| unknown [Lotus japonicus]
          Length = 230

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 39/47 (82%)
 Frame = +3

Query: 219 GKSRVGLVTMDLLGGYCTVDSKELDLDLHVPSGFEKRLDMKSGKLYL 359
           G+    L+T DLLGG  +++S+ELDLD+ VPSG+EKRLD++SGKLY+
Sbjct: 16  GEKSKALMTRDLLGG-SSIESQELDLDMRVPSGWEKRLDLQSGKLYI 61


>ref|XP_002513379.1| conserved hypothetical protein [Ricinus communis]
           gi|223547287|gb|EEF48782.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = +3

Query: 219 GKSRVGLVTMDLLG-GYCTV--DSKELDLDLHVPSGFEKRLDMKSGKLYL 359
           GKS   L+T DLLG G  ++  +S+ELDLDL VPSG+EKRLD+KSGK+YL
Sbjct: 28  GKSTASLITRDLLGAGDASLKDESQELDLDLQVPSGWEKRLDLKSGKVYL 77


>ref|XP_002310095.1| predicted protein [Populus trichocarpa] gi|222852998|gb|EEE90545.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 18/74 (24%)
 Frame = +3

Query: 192 MATEVSSIM-----------------GKSRVGLVTMDLLGGYCT-VDSKELDLDLHVPSG 317
           MA EVSS++                 G     L+T DLLGG     +S ELDLDL VPSG
Sbjct: 1   MAAEVSSLVRLFSGYKDDRNAGSEPGGAKSTALITRDLLGGATLETESLELDLDLQVPSG 60

Query: 318 FEKRLDMKSGKLYL 359
           +EKRLD+KSGK+YL
Sbjct: 61  WEKRLDLKSGKVYL 74


Top